BLASTX nr result

ID: Atractylodes22_contig00041711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041711
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   286   1e-75
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   285   4e-75
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   281   3e-74
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              281   3e-74
ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [S...   278   3e-73

>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  286 bits (733), Expect = 1e-75
 Identities = 130/175 (74%), Positives = 151/175 (86%)
 Frame = -1

Query: 530  YKGDPALQFIKHVCAVLLLDQNVQHDILILRKNLLKYVRVKEFAPEAEFQDSSFSFTLPN 351
            +KGDPAL+FIKHVCAVL LDQ+VQH++L++RKNLLKYVRV+EFAPEAEF D   SF LPN
Sbjct: 2038 HKGDPALEFIKHVCAVLALDQHVQHEVLVMRKNLLKYVRVREFAPEAEFHDPCPSFILPN 2097

Query: 350  VFCSYCYGCRDLDLCRDRAILTQEWRCAVSQCGQPYNREAMENGLLQIVRQRERLYHLQD 171
            V CSYC  CRDLDLCRD A+L +EWRCAV QCGQPY+RE MEN LLQIVRQRERLYHLQD
Sbjct: 2098 VICSYCNDCRDLDLCRDSAVLAEEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQD 2157

Query: 170  LVCLKCRQVKAAHLAEYCACAGCFALKEDASVFRNKMEVFFNIAIHQKFELLKEC 6
            LVCL+C QVKAAHL+E C+CAG +  +ED S FR KM++F N+AI QKF+LL+EC
Sbjct: 2158 LVCLRCNQVKAAHLSEQCSCAGSYRCREDVSEFRRKMQIFLNVAIRQKFQLLQEC 2212


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  285 bits (728), Expect = 4e-75
 Identities = 131/176 (74%), Positives = 150/176 (85%)
 Frame = -1

Query: 533  VYKGDPALQFIKHVCAVLLLDQNVQHDILILRKNLLKYVRVKEFAPEAEFQDSSFSFTLP 354
            ++K  PAL+FIKHVCAVL LD NVQH++L++RKNLLKYVRV+EFAPEAEF D   SF LP
Sbjct: 2044 IHKRVPALEFIKHVCAVLALDLNVQHEVLVMRKNLLKYVRVREFAPEAEFHDPCPSFVLP 2103

Query: 353  NVFCSYCYGCRDLDLCRDRAILTQEWRCAVSQCGQPYNREAMENGLLQIVRQRERLYHLQ 174
            NV CSYC  CRDLDLCRD A+L QEWRCAV QCGQPY+RE MEN LLQIVRQRERLYHLQ
Sbjct: 2104 NVICSYCNDCRDLDLCRDTALLAQEWRCAVPQCGQPYDREGMENALLQIVRQRERLYHLQ 2163

Query: 173  DLVCLKCRQVKAAHLAEYCACAGCFALKEDASVFRNKMEVFFNIAIHQKFELLKEC 6
            DLVC++C QVKAAHLAE CACAG +  KED S FR+KM++F N+AI QKF+LL+EC
Sbjct: 2164 DLVCIRCNQVKAAHLAEQCACAGAYRCKEDVSEFRSKMQIFLNVAISQKFQLLQEC 2219


>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  281 bits (720), Expect = 3e-74
 Identities = 133/175 (76%), Positives = 148/175 (84%)
 Frame = -1

Query: 530  YKGDPALQFIKHVCAVLLLDQNVQHDILILRKNLLKYVRVKEFAPEAEFQDSSFSFTLPN 351
            + GD AL+FIKHVCAVL LDQNVQHDIL++RKNLLKYV V+EFAPEAEF D   SF LPN
Sbjct: 2032 HTGDAALEFIKHVCAVLALDQNVQHDILVMRKNLLKYVHVREFAPEAEFCDPCQSFILPN 2091

Query: 350  VFCSYCYGCRDLDLCRDRAILTQEWRCAVSQCGQPYNREAMENGLLQIVRQRERLYHLQD 171
            V CSYC  CRDLDLCRD A+L QEWRCAV QCGQPY+RE MEN LLQIVRQRERLYH+QD
Sbjct: 2092 VICSYCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHVQD 2151

Query: 170  LVCLKCRQVKAAHLAEYCACAGCFALKEDASVFRNKMEVFFNIAIHQKFELLKEC 6
            LVCLKC QVKAAHLAE C+CAG F  KED S F++KM+VF  IA+ QKF+LL+EC
Sbjct: 2152 LVCLKCNQVKAAHLAEQCSCAGSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQEC 2206


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  281 bits (720), Expect = 3e-74
 Identities = 133/175 (76%), Positives = 148/175 (84%)
 Frame = -1

Query: 530  YKGDPALQFIKHVCAVLLLDQNVQHDILILRKNLLKYVRVKEFAPEAEFQDSSFSFTLPN 351
            + GD AL+FIKHVCAVL LDQNVQHDIL++RKNLLKYV V+EFAPEAEF D   SF LPN
Sbjct: 2541 HTGDAALEFIKHVCAVLALDQNVQHDILVMRKNLLKYVHVREFAPEAEFCDPCQSFILPN 2600

Query: 350  VFCSYCYGCRDLDLCRDRAILTQEWRCAVSQCGQPYNREAMENGLLQIVRQRERLYHLQD 171
            V CSYC  CRDLDLCRD A+L QEWRCAV QCGQPY+RE MEN LLQIVRQRERLYH+QD
Sbjct: 2601 VICSYCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHVQD 2660

Query: 170  LVCLKCRQVKAAHLAEYCACAGCFALKEDASVFRNKMEVFFNIAIHQKFELLKEC 6
            LVCLKC QVKAAHLAE C+CAG F  KED S F++KM+VF  IA+ QKF+LL+EC
Sbjct: 2661 LVCLKCNQVKAAHLAEQCSCAGSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQEC 2715


>ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor]
            gi|241931984|gb|EES05129.1| hypothetical protein
            SORBIDRAFT_04g020730 [Sorghum bicolor]
          Length = 2135

 Score =  278 bits (712), Expect = 3e-73
 Identities = 129/176 (73%), Positives = 149/176 (84%)
 Frame = -1

Query: 530  YKGDPALQFIKHVCAVLLLDQNVQHDILILRKNLLKYVRVKEFAPEAEFQDSSFSFTLPN 351
            +KGD AL+FIKHVCAVL LDQNVQHDIL +RKNLLK VRVKEFAPEA+FQD   SFTLPN
Sbjct: 1953 HKGDAALEFIKHVCAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQDPCASFTLPN 2012

Query: 350  VFCSYCYGCRDLDLCRDRAILTQEWRCAVSQCGQPYNREAMENGLLQIVRQRERLYHLQD 171
            V CSYC  CRDLDLCRD  +  QEWRCAV QCGQPY+RE MEN LLQ+VRQRERLYHLQD
Sbjct: 2013 VICSYCNDCRDLDLCRDSTLQGQEWRCAVPQCGQPYHREQMENALLQVVRQRERLYHLQD 2072

Query: 170  LVCLKCRQVKAAHLAEYCACAGCFALKEDASVFRNKMEVFFNIAIHQKFELLKECV 3
            LVC++CRQVKAAHL+E C+C G F  KE++S F +KM VF  +A++QKF+LL++CV
Sbjct: 2073 LVCVRCRQVKAAHLSEQCSCGGSFRCKEESSYFLSKMRVFLKVAVNQKFQLLQDCV 2128


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