BLASTX nr result

ID: Atractylodes22_contig00041604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041604
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142477.1| PREDICTED: uncharacterized mitochondrial pro...    91   1e-16
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]    86   2e-15
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]    85   5e-15
gb|AAO26684.1|AF478370_1 gag-pol polyprotein [Vitis vinifera]          84   9e-15
gb|AAO26690.1|AF478377_1 gag-pol polyprotein [Vitis vinifera]          83   3e-14

>ref|XP_004142477.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Cucumis sativus]
          Length = 203

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 52/92 (56%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   STSAIDTLINSLAIAFPVKRLGELSYFLVIEVSKCSSG-LFLSQNKYITDLLKSTNMFHA 179
           S+ A+D LI SL   F +K LG+LSYFL IEVS    G +FLSQ+KYI DLL  T M  A
Sbjct: 50  SSIALDELIKSLNSTFALKDLGKLSYFLGIEVSYPEKGGMFLSQSKYILDLLHQTKMAEA 109

Query: 180 KPMQTPMASSMVLSATDGRHFSNPQLYRSVVG 275
           +P+ TPM S  +LSA  G  F +P LYRSVVG
Sbjct: 110 QPIATPMISGPILSACQGELFYDPYLYRSVVG 141


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/91 (48%), Positives = 60/91 (65%)
 Frame = +3

Query: 3    STSAIDTLINSLAIAFPVKRLGELSYFLVIEVSKCSSGLFLSQNKYITDLLKSTNMFHAK 182
            +  A  T I  L+  F +K LG L+YFL +EV+  ++GLFLSQ+KYI DLL  T+M  AK
Sbjct: 821  NVEAAQTFIQQLSQRFSLKDLGPLTYFLGVEVTSHTNGLFLSQHKYIADLLNRTHMTEAK 880

Query: 183  PMQTPMASSMVLSATDGRHFSNPQLYRSVVG 275
            P  TP+A+S +L+   G   SNP  YR++VG
Sbjct: 881  PAPTPLATSPILTLQSGTPLSNPTEYRTMVG 911


>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
          Length = 478

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/91 (48%), Positives = 59/91 (64%)
 Frame = +3

Query: 3   STSAIDTLINSLAIAFPVKRLGELSYFLVIEVSKCSSGLFLSQNKYITDLLKSTNMFHAK 182
           +  A  T I  L+  F +K LG L+YFL +EV+  ++GLFLSQ KYI DLL  T+M  AK
Sbjct: 161 NVEAAQTFIQQLSQRFSLKDLGPLTYFLGVEVTSHTNGLFLSQRKYIADLLNRTHMTEAK 220

Query: 183 PMQTPMASSMVLSATDGRHFSNPQLYRSVVG 275
           P  TP+A+S +L+   G   S+P  YR+VVG
Sbjct: 221 PAPTPLATSPILTLQSGTPLSDPTEYRTVVG 251


>gb|AAO26684.1|AF478370_1 gag-pol polyprotein [Vitis vinifera]
          Length = 326

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 46/90 (51%), Positives = 55/90 (61%)
 Frame = +3

Query: 6   TSAIDTLINSLAIAFPVKRLGELSYFLVIEVSKCSSGLFLSQNKYITDLLKSTNMFHAKP 185
           TS + T ++S    F  K LGEL YFL IEVS+   G+FLSQ KY+ DLLK T    AKP
Sbjct: 23  TSDLKTFMHS---KFHTKDLGELKYFLGIEVSRSKKGMFLSQRKYVLDLLKETGKIEAKP 79

Query: 186 MQTPMASSMVLSATDGRHFSNPQLYRSVVG 275
             TPM  ++ L   DG  F NP+ YR VVG
Sbjct: 80  CTTPMVPNVQLMPDDGDPFYNPERYRRVVG 109


>gb|AAO26690.1|AF478377_1 gag-pol polyprotein [Vitis vinifera]
          Length = 326

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/76 (55%), Positives = 48/76 (63%)
 Frame = +3

Query: 48  FPVKRLGELSYFLVIEVSKCSSGLFLSQNKYITDLLKSTNMFHAKPMQTPMASSMVLSAT 227
           F  K LGEL YFL IEVS+   G+FLSQ KY+ DLLK T    AKP  TPM  ++ L   
Sbjct: 34  FHTKDLGELKYFLGIEVSRSKKGMFLSQRKYVLDLLKETGKIEAKPCTTPMVPNVQLMPD 93

Query: 228 DGRHFSNPQLYRSVVG 275
           DG  F NP+ YR VVG
Sbjct: 94  DGDPFYNPERYRRVVG 109


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