BLASTX nr result

ID: Atractylodes22_contig00041586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041586
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]   105   4e-21
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   102   3e-20
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   102   3e-20
emb|CAJ65876.1| putative integrase [Cucumis melo]                     100   1e-19
emb|CAJ65875.1| putative integrase [Cucumis melo]                     100   1e-19

>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/68 (67%), Positives = 58/68 (85%)
 Frame = +1

Query: 49  RVWDEVTMDFVEGLPKSEGQDAILVVVDRLSKYAHFMSLKHPYNAQGVAAVFAREIIRLH 228
           ++WD+VTMDF+EGLPKSEG + ILVVVDRLSKYAHF  LKHP+ AQ VAA+F R++++LH
Sbjct: 649 KIWDDVTMDFIEGLPKSEGYNFILVVVDRLSKYAHFSLLKHPFXAQTVAAIFVRDVVKLH 708

Query: 229 GVPMGIVS 252
           G P  I+S
Sbjct: 709 GFPRSIIS 716


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  102 bits (255), Expect = 3e-20
 Identities = 46/67 (68%), Positives = 58/67 (86%)
 Frame = +1

Query: 52   VWDEVTMDFVEGLPKSEGQDAILVVVDRLSKYAHFMSLKHPYNAQGVAAVFAREIIRLHG 231
            +W++++MDFVEGLPKS+G D ILVVVDRLSKYAHF++LKHP+ A  VAAVF +EI++LHG
Sbjct: 1174 IWEDISMDFVEGLPKSQGWDTILVVVDRLSKYAHFITLKHPFTAPTVAAVFIKEIVKLHG 1233

Query: 232  VPMGIVS 252
             P  IVS
Sbjct: 1234 FPSTIVS 1240


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  102 bits (255), Expect = 3e-20
 Identities = 43/68 (63%), Positives = 60/68 (88%)
 Frame = +1

Query: 49   RVWDEVTMDFVEGLPKSEGQDAILVVVDRLSKYAHFMSLKHPYNAQGVAAVFAREIIRLH 228
            R+W++++MDF+ GLPKS+G +A+LVVVDRLSKY+HF+ LKHPY A+ +A VF RE++RLH
Sbjct: 932  RIWEDLSMDFIMGLPKSKGYEAVLVVVDRLSKYSHFILLKHPYTAKVIADVFIREVVRLH 991

Query: 229  GVPMGIVS 252
            G+P+ IVS
Sbjct: 992  GIPLSIVS 999


>emb|CAJ65876.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  100 bits (250), Expect = 1e-19
 Identities = 44/68 (64%), Positives = 59/68 (86%)
 Frame = +1

Query: 49  RVWDEVTMDFVEGLPKSEGQDAILVVVDRLSKYAHFMSLKHPYNAQGVAAVFAREIIRLH 228
           R+W++++MDFVEGLP+S+G D ILVVVDRLSKYAHF++L HP++A+ VA VF +E++RLH
Sbjct: 38  RIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAHFITLGHPFSAKVVALVFVKEVVRLH 97

Query: 229 GVPMGIVS 252
           G P  IVS
Sbjct: 98  GYPRSIVS 105


>emb|CAJ65875.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  100 bits (250), Expect = 1e-19
 Identities = 44/68 (64%), Positives = 59/68 (86%)
 Frame = +1

Query: 49  RVWDEVTMDFVEGLPKSEGQDAILVVVDRLSKYAHFMSLKHPYNAQGVAAVFAREIIRLH 228
           R+W++++MDFVEGLP+S+G D ILVVVDRLSKYAHF++L HP++A+ VA VF +E++RLH
Sbjct: 38  RIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAHFITLGHPFSAKVVALVFVKEVVRLH 97

Query: 229 GVPMGIVS 252
           G P  IVS
Sbjct: 98  GYPRSIVS 105


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