BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041508
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25589.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   155   2e-36
ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   155   3e-36
ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein c...   150   1e-34
ref|NP_172112.1| U5 small nuclear ribonucleoprotein component [A...   148   4e-34

>emb|CBI25589.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  155 bits (393), Expect = 2e-36
 Identities = 86/149 (57%), Positives = 105/149 (70%), Gaps = 4/149 (2%)
 Frame = -3

Query: 435  IYSDIQLKVGHPYVSFWETVKSPSVLKCSAETRDKKFRITMTAEPLH----EFIEDGVVS 268
            +YS++++KV  P VSF ETV   S +KC AET +KK +ITM AEPL     E IE+GVVS
Sbjct: 605  LYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVS 664

Query: 267  VDWGGRRLKNFIQTNYGQDPPDARSLWSYERGKQGCNILLVGTLSSEVDRNSLNAVKISI 88
            +DW  ++L +F QT Y  D   ARS+W++   KQG NILL  TLSSEVD+N LNAVK SI
Sbjct: 665  IDWHRKKLGDFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSI 724

Query: 87   NEGFASGAHMGPLCNETIHCVKFKIVDAR 1
             +GF  GA  GPLC+E I  VKFKIVDAR
Sbjct: 725  VQGFQWGAREGPLCDEPIRNVKFKIVDAR 753


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
            [Vitis vinifera] gi|147858113|emb|CAN81413.1|
            hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  155 bits (393), Expect = 2e-36
 Identities = 86/149 (57%), Positives = 105/149 (70%), Gaps = 4/149 (2%)
 Frame = -3

Query: 435  IYSDIQLKVGHPYVSFWETVKSPSVLKCSAETRDKKFRITMTAEPLH----EFIEDGVVS 268
            +YS++++KV  P VSF ETV   S +KC AET +KK +ITM AEPL     E IE+GVVS
Sbjct: 662  LYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVS 721

Query: 267  VDWGGRRLKNFIQTNYGQDPPDARSLWSYERGKQGCNILLVGTLSSEVDRNSLNAVKISI 88
            +DW  ++L +F QT Y  D   ARS+W++   KQG NILL  TLSSEVD+N LNAVK SI
Sbjct: 722  IDWHRKKLGDFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSI 781

Query: 87   NEGFASGAHMGPLCNETIHCVKFKIVDAR 1
             +GF  GA  GPLC+E I  VKFKIVDAR
Sbjct: 782  VQGFQWGAREGPLCDEPIRNVKFKIVDAR 810


>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component-like
            [Cucumis sativus] gi|449493675|ref|XP_004159406.1|
            PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
            component-like [Cucumis sativus]
          Length = 988

 Score =  155 bits (392), Expect = 3e-36
 Identities = 86/149 (57%), Positives = 105/149 (70%), Gaps = 4/149 (2%)
 Frame = -3

Query: 435  IYSDIQLKVGHPYVSFWETVKSPSVLKCSAETRDKKFRITMTAEPLH----EFIEDGVVS 268
            +YS++++KV  P VSF ETV   S +KC AET +KK +ITM AEPL     E IE+GVVS
Sbjct: 662  LYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVS 721

Query: 267  VDWGGRRLKNFIQTNYGQDPPDARSLWSYERGKQGCNILLVGTLSSEVDRNSLNAVKISI 88
            +DW  ++L +F QT Y  D   ARS+W++   KQG NILL  TLSSEVD+N LNAVK SI
Sbjct: 722  LDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSI 781

Query: 87   NEGFASGAHMGPLCNETIHCVKFKIVDAR 1
             +GF  GA  GPLC+E I  VKFKIVDAR
Sbjct: 782  VQGFQWGAREGPLCDEPIRNVKFKIVDAR 810


>ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein component [Medicago
            truncatula] gi|355510562|gb|AES91704.1| 116 kDa U5 small
            nuclear ribonucleoprotein component [Medicago truncatula]
          Length = 983

 Score =  150 bits (378), Expect = 1e-34
 Identities = 83/149 (55%), Positives = 102/149 (68%), Gaps = 4/149 (2%)
 Frame = -3

Query: 435  IYSDIQLKVGHPYVSFWETVKSPSVLKCSAETRDKKFRITMTAEPLH----EFIEDGVVS 268
            +YS++++KV  P VSF ETV   S +KC AET +KK +ITM AEPL     E IE+GVVS
Sbjct: 662  LYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVS 721

Query: 267  VDWGGRRLKNFIQTNYGQDPPDARSLWSYERGKQGCNILLVGTLSSEVDRNSLNAVKISI 88
             DW  ++L  F QT Y  D   ARS+W++   KQG NILL  TL +EVD++ LNAVK SI
Sbjct: 722  TDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSI 781

Query: 87   NEGFASGAHMGPLCNETIHCVKFKIVDAR 1
             +GF  GA  GPLC+E I  VKFKIVDAR
Sbjct: 782  VQGFQWGAREGPLCDEPIRNVKFKIVDAR 810


>ref|NP_172112.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana]
            gi|30679607|ref|NP_849600.1| U5 small nuclear
            ribonucleoprotein component [Arabidopsis thaliana]
            gi|8844127|gb|AAF80219.1|AC025290_8 Contains similarity
            to an U5 snRNP-specific protein 116 kD from Homo sapiens
            gi|4759280 and contains elongation factor G C-terminus
            PF|00679 and is a member of the elongation factor Tu
            family PF|00009 [Arabidopsis thaliana]
            gi|110741512|dbj|BAE98706.1| elongation factor like
            protein [Arabidopsis thaliana]
            gi|332189840|gb|AEE27961.1| U5 small nuclear
            ribonucleoprotein component [Arabidopsis thaliana]
            gi|332189841|gb|AEE27962.1| U5 small nuclear
            ribonucleoprotein component [Arabidopsis thaliana]
          Length = 987

 Score =  148 bits (374), Expect = 4e-34
 Identities = 82/149 (55%), Positives = 103/149 (69%), Gaps = 4/149 (2%)
 Frame = -3

Query: 435  IYSDIQLKVGHPYVSFWETVKSPSVLKCSAETRDKKFRITMTAEPLH----EFIEDGVVS 268
            +YS++++KV  P VSF ETV   S +KC AET +KK +ITM AEPL     E IE+GVVS
Sbjct: 661  LYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVVS 720

Query: 267  VDWGGRRLKNFIQTNYGQDPPDARSLWSYERGKQGCNILLVGTLSSEVDRNSLNAVKISI 88
            +DW  ++L +F +T Y  D   ARS+W++   KQG NILL  TL +EVDRN + AVK SI
Sbjct: 721  IDWNRKQLGDFFRTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDSI 780

Query: 87   NEGFASGAHMGPLCNETIHCVKFKIVDAR 1
             +GF  GA  GPLC+E I  VKFKIVDAR
Sbjct: 781  VQGFQWGAREGPLCDEPIRNVKFKIVDAR 809