BLASTX nr result

ID: Atractylodes22_contig00041498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041498
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reduct...    82   3e-14
emb|CBI37680.3| unnamed protein product [Vitis vinifera]               82   6e-14
ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase...    77   1e-12
gb|AAA32788.1| dihydrofolate reductase-thymidylate synthase [Ara...    77   2e-12
ref|NP_179230.1| thymidylate synthase [Arabidopsis thaliana] gi|...    77   2e-12

>ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase-like [Vitis vinifera]
          Length = 524

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 51/112 (45%), Positives = 58/112 (51%), Gaps = 32/112 (28%)
 Frame = -1

Query: 240 AIDALEFRPWYSSFPLVENGLRYCFTTYVRVGISAVEALIKTNG---------------- 109
           AID+L F+PWYSSFPLVEN +RY F TYVRV  SA E+ I+ NG                
Sbjct: 171 AIDSLVFQPWYSSFPLVENNIRYSFMTYVRVRSSADESQIQNNGDSGLESIKFEVKKFSF 230

Query: 108 ----------------LLXXXXXXXXXXXDRTGTYTLSKFGCQMLFNLRKSF 1
                           L+           DRTGT TLSKFGCQM FNLRK+F
Sbjct: 231 LPKMIFERHEEYIYLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTF 282


>emb|CBI37680.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 48/90 (53%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
 Frame = -1

Query: 240 AIDALEFRPWYSSFPLVENGLRYCFTTYVRVGISAVEALIKT----------NGLLXXXX 91
           AID+L F+PWYSSFPLVEN +RY F TYVRV I     L K             L+    
Sbjct: 277 AIDSLVFQPWYSSFPLVENNIRYSFMTYVRVRIKKFSFLPKMIFERHEEYIYLRLVEDII 336

Query: 90  XXXXXXXDRTGTYTLSKFGCQMLFNLRKSF 1
                  DRTGT TLSKFGCQM FNLRK+F
Sbjct: 337 SNGVQRDDRTGTGTLSKFGCQMRFNLRKTF 366


>ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
           gi|222849082|gb|EEE86629.1| dihydrofolate
           reductase-thymidylate synthase [Populus trichocarpa]
          Length = 528

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 47/115 (40%), Positives = 56/115 (48%), Gaps = 35/115 (30%)
 Frame = -1

Query: 240 AIDALEFRPWYSSFPLVENGLRYCFTTYVRVGISAVEALIKTNG---------------- 109
           AID   F+PWYSSFP VEN +R+CFTTYVRV  S +E+  + NG                
Sbjct: 172 AIDTSVFQPWYSSFPKVENDIRHCFTTYVRVRSSTIESHSQNNGENSDGNSENSKFEVKK 231

Query: 108 -------------------LLXXXXXXXXXXXDRTGTYTLSKFGCQMLFNLRKSF 1
                              ++           DRTGT TLSKFGCQM FNLRK+F
Sbjct: 232 FSFLPKMVFERHEEYLYLRMVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRKNF 286


>gb|AAA32788.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
          Length = 519

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/109 (42%), Positives = 57/109 (52%), Gaps = 29/109 (26%)
 Frame = -1

Query: 240 AIDALEFRPWYSSFPLVENGLRYCFTTYVRVGISAVEALIKTNG---------------- 109
           AID   ++PW SSFP+ ENGLR+CFTT+VRV  SA E+  ++NG                
Sbjct: 169 AIDTSVYQPWSSSFPVTENGLRFCFTTFVRVKSSADESSDESNGSQSLQFDGKKFLFLPK 228

Query: 108 -------------LLXXXXXXXXXXXDRTGTYTLSKFGCQMLFNLRKSF 1
                        ++           DRTGT TLSKFGCQM FNLR+SF
Sbjct: 229 MVFDQHEEFLYLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRRSF 277


>ref|NP_179230.1| thymidylate synthase [Arabidopsis thaliana]
           gi|21264432|sp|Q05762.2|DRTS1_ARATH RecName:
           Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase 1; Short=DHFR-TS 1; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase gi|4544392|gb|AAD22302.1|
           dihydrofolate reductase-thymidylate synthase
           [Arabidopsis thaliana] gi|17381024|gb|AAL36324.1|
           putative dihydrofolate reductase-thymidylate synthase
           [Arabidopsis thaliana] gi|21281275|gb|AAM45080.1|
           putative dihydrofolate reductase-thymidylate synthase
           [Arabidopsis thaliana] gi|330251395|gb|AEC06489.1|
           thymidylate synthase [Arabidopsis thaliana]
          Length = 519

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/109 (42%), Positives = 57/109 (52%), Gaps = 29/109 (26%)
 Frame = -1

Query: 240 AIDALEFRPWYSSFPLVENGLRYCFTTYVRVGISAVEALIKTNG---------------- 109
           AID   ++PW SSFP+ ENGLR+CFTT+VRV  SA E+  ++NG                
Sbjct: 169 AIDTSVYQPWSSSFPVTENGLRFCFTTFVRVKSSADESSDESNGSQSLQFDGKKFLFLPK 228

Query: 108 -------------LLXXXXXXXXXXXDRTGTYTLSKFGCQMLFNLRKSF 1
                        ++           DRTGT TLSKFGCQM FNLR+SF
Sbjct: 229 MVFDQHEEFLYLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRRSF 277


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