BLASTX nr result

ID: Atractylodes22_contig00041481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041481
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    82   3e-14
ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...    63   2e-08
gb|AAO23078.1| polyprotein [Glycine max]                               62   6e-08
ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250...    61   1e-07
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]       57   1e-06

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/89 (47%), Positives = 53/89 (59%)
 Frame = -2

Query: 387  PEFIRATRSINRGGESVSQWLIQWKGQTVDEATWEDVISIRSQYPDFCLEDKTTVEGRSN 208
            PE +   R+I   GE + Q L+ W GQ V+EATWED + IRSQ+P+F LEDK  + G S 
Sbjct: 1207 PETVLTRRTIQVQGEKIDQVLVHWMGQKVEEATWEDTLIIRSQFPNFYLEDKAMLSGGSI 1266

Query: 207  DTKARSPAHVEAQQLEKPKIWKVYSRRSK 121
               A S  H        PK+W+VYSRR K
Sbjct: 1267 VRTAESLVH---NTTVGPKVWQVYSRRCK 1292


>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
 Frame = -2

Query: 390  IPEFIRATRSINRGGESVSQWLIQWKGQTVDEATWEDVISIRSQYPDFCLEDKTTVEGRS 211
            +P  I A R+I R G+ V Q L+QW     + ATWED ++    YPD+ LEDK    G  
Sbjct: 1262 VPAAICAVRTILRQGKEVQQILVQWTASDPENATWEDFVAFCRLYPDYHLEDKVDFHGVG 1321

Query: 210  NDTKARSP--AHV---EAQQLEKPKIWKV 139
            NDT    P   HV   EA  +E+P   KV
Sbjct: 1322 NDTFVAIPLQQHVQTTEASVVEEPNTPKV 1350


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/66 (45%), Positives = 38/66 (57%)
 Frame = -2

Query: 387  PEFIRATRSINRGGESVSQWLIQWKGQTVDEATWEDVISIRSQYPDFCLEDKTTVEGRSN 208
            P  I A+R I RG   + Q L+QW+    DEATWED+  I++ YP F LEDK   +G  N
Sbjct: 1443 PVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKASYPTFNLEDKVVFKGEGN 1502

Query: 207  DTKARS 190
             T   S
Sbjct: 1503 VTNGMS 1508


>ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250138 [Vitis vinifera]
          Length = 1406

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/92 (40%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
 Frame = -2

Query: 372 ATRSINRGGESVSQWLIQWKGQTVDEATWEDVISIRSQYPDFCLEDKTTVEGRSNDTKAR 193
           A R+I R G+ V Q L+QW     + ATWED ++    YPD+ LEDK    G  NDT   
Sbjct: 654 AVRTILRQGKEVQQILVQWTASDPENATWEDFVAFCRLYPDYHLEDKVDFHGVGNDTFVA 713

Query: 192 SP--AHV---EAQQLEKPKIWKVYSRRSKGIK 112
            P   HV   EA  +E+P   K   + SK  K
Sbjct: 714 IPLQQHVQTTEASVVEEPNTPKEEQKPSKMAK 745


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = -2

Query: 390  IPEFIRATRSINRGGESVSQWLIQWKGQTVDEATWEDVISIRSQYPDFCLEDKTTVEGRS 211
            +P  I   R I+RGGE ++Q  + W G T D ATWEDV ++R+++P   + D+    G+ 
Sbjct: 1490 VPTRILQRRFIDRGGELIAQVKVVWSGMTEDLATWEDVEALRARFPKALIWDQAGARGQG 1549

Query: 210  NDTKARS 190
            N +KA S
Sbjct: 1550 NVSKASS 1556


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