BLASTX nr result

ID: Atractylodes22_contig00041461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041461
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-co...   194   6e-48
ref|XP_003628951.1| U2-associated protein SR140 [Medicago trunca...   192   3e-47
emb|CBI21155.3| unnamed protein product [Vitis vinifera]              189   2e-46
ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-co...   189   3e-46

>ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 971

 Score =  194 bits (493), Expect = 6e-48
 Identities = 91/102 (89%), Positives = 98/102 (96%), Gaps = 1/102 (0%)
 Frame = +3

Query: 39  WQDGRQTATTLSSRFDELPDEFDPSGK-PGSFDDGDPQTTNLYVGNLSPQVDENFLLRTF 215
           W+DGR T  ++SSRFDELPD+FDPSGK PGSFDDGDPQTTNLYVGNLSP+VDENFLLRTF
Sbjct: 147 WRDGRHTEHSISSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPKVDENFLLRTF 206

Query: 216 GRFGPIASVKIMWPRTEEERKRQKNCGFVAFMNRADGQAAKD 341
           GRFGPIASVKIMWPRTEEER+RQ+NCGFVAFMNRADGQAAKD
Sbjct: 207 GRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKD 248


>ref|XP_003628951.1| U2-associated protein SR140 [Medicago truncatula]
           gi|355522973|gb|AET03427.1| U2-associated protein SR140
           [Medicago truncatula]
          Length = 1139

 Score =  192 bits (487), Expect = 3e-47
 Identities = 91/102 (89%), Positives = 97/102 (95%), Gaps = 1/102 (0%)
 Frame = +3

Query: 39  WQDGRQTATTLSSRFDELPDEFDPSGK-PGSFDDGDPQTTNLYVGNLSPQVDENFLLRTF 215
           W+DGR    ++SSRFDELPD+FDPSGK PGSFDDGDPQTTNLYVGNLSPQVDENFLLRTF
Sbjct: 177 WRDGRIGEHSISSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPQVDENFLLRTF 236

Query: 216 GRFGPIASVKIMWPRTEEERKRQKNCGFVAFMNRADGQAAKD 341
           GRFGPIASVKIMWPRTEEER+RQ+NCGFVAFMNRADGQAAKD
Sbjct: 237 GRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKD 278


>emb|CBI21155.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/103 (88%), Positives = 97/103 (94%), Gaps = 2/103 (1%)
 Frame = +3

Query: 39  WQDGRQT-ATTLSSRFDELPDEFDPSGK-PGSFDDGDPQTTNLYVGNLSPQVDENFLLRT 212
           W+DGR   ++ L SRFDELPD+FDPSGK PGSFDDGDPQTTNLYVGNLSPQVDENFLLRT
Sbjct: 147 WRDGRHNDSSALPSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPQVDENFLLRT 206

Query: 213 FGRFGPIASVKIMWPRTEEERKRQKNCGFVAFMNRADGQAAKD 341
           FGRFGPIASVKIMWPRTEEER+RQ+NCGFVAFMNRADGQAAKD
Sbjct: 207 FGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKD 249


>ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1|
           predicted protein [Populus trichocarpa]
          Length = 988

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/103 (88%), Positives = 98/103 (95%), Gaps = 2/103 (1%)
 Frame = +3

Query: 39  WQDGRQTATTL-SSRFDELPDEFDPSGK-PGSFDDGDPQTTNLYVGNLSPQVDENFLLRT 212
           W++GR T ++  SSRFDELPD+FDPSGK PGSFDDGDPQTTNLYVGNLSPQVDENFLLRT
Sbjct: 147 WREGRHTESSAPSSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPQVDENFLLRT 206

Query: 213 FGRFGPIASVKIMWPRTEEERKRQKNCGFVAFMNRADGQAAKD 341
           FGRFGPIASVKIMWPRTEEER+RQ+NCGFVAFMNRADGQAAKD
Sbjct: 207 FGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKD 249


>ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 972

 Score =  189 bits (479), Expect = 3e-46
 Identities = 91/103 (88%), Positives = 98/103 (95%), Gaps = 2/103 (1%)
 Frame = +3

Query: 39  WQDGRQTATTL-SSRFDELPDEFDPSGK-PGSFDDGDPQTTNLYVGNLSPQVDENFLLRT 212
           W+DGR T  ++ SSRFDELPD+FDPSGK PGSFDDGDPQTTNLYVGNLSP+VDENFLLRT
Sbjct: 147 WRDGRLTEHSIPSSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPKVDENFLLRT 206

Query: 213 FGRFGPIASVKIMWPRTEEERKRQKNCGFVAFMNRADGQAAKD 341
           FGRFGPIASVKIMWPRTEEER+RQ+NCGFVAFMNRADGQAAKD
Sbjct: 207 FGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKD 249


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