BLASTX nr result

ID: Atractylodes22_contig00041439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041439
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30029.3| unnamed protein product [Vitis vinifera]              149   5e-34
ref|XP_002303178.1| hypothetical protein POPTRDRAFT_756569 [Popu...   115   8e-24
emb|CAN80277.1| hypothetical protein VITISV_028854 [Vitis vinifera]   113   4e-23
ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|3098401...   107   2e-21
dbj|BAB02425.1| helicase-like protein [Arabidopsis thaliana]          107   3e-21

>emb|CBI30029.3| unnamed protein product [Vitis vinifera]
          Length = 1695

 Score =  149 bits (376), Expect = 5e-34
 Identities = 97/213 (45%), Positives = 122/213 (57%), Gaps = 4/213 (1%)
 Frame = -2

Query: 675 QSSLAQEQPAIQYEDHTDVNGCAEPNVESQSNILETDEDY--KSENEPEDDEHTIEEDEA 502
           Q  L +E+ +IQY++  D      P    QS I + DEDY  +SE E EDDEHTIEEDEA
Sbjct: 157 QQYLPKERCSIQYKEVDDPGFKEVP----QSGIADVDEDYDMQSEEELEDDEHTIEEDEA 212

Query: 501 LITEDERREELAALHNEVDLPLEELLRRYAVGEASTXXXXXXXXXXXXXXXXGTPGKTEG 322
           LITE+ER+EEL ALHNE+DLPLEELL+RYA+ + S                  +  K E 
Sbjct: 213 LITEEERQEELEALHNEIDLPLEELLKRYAMKKVS--CDENNIEKLLSVSSGSSQDKDEE 270

Query: 321 VAEPTQASEDDSRCNGNDGSDH-RSRRESSHPARSRHCVESNGGLSVSENHHSEVKEHYI 145
            AEPT   +D     G D SD  +  + SS     R C ESNG LS+SE+H  EV     
Sbjct: 271 EAEPTSVGDDHFGGEGQDLSDTCKIDKNSSLTVIGRRCGESNGSLSISEHHLLEVDTCQA 330

Query: 144 RKRKGL-REARKKHLELDFNDENEDGDFILANG 49
           +    + RE+ ++    DFNDE EDGDF+LA G
Sbjct: 331 KNVSEISRESDEESKVYDFNDEQEDGDFVLATG 363


>ref|XP_002303178.1| hypothetical protein POPTRDRAFT_756569 [Populus trichocarpa]
           gi|222840610|gb|EEE78157.1| hypothetical protein
           POPTRDRAFT_756569 [Populus trichocarpa]
          Length = 418

 Score =  115 bits (288), Expect = 8e-24
 Identities = 73/186 (39%), Positives = 101/186 (54%), Gaps = 2/186 (1%)
 Frame = -2

Query: 612 CAEPNVESQSNILETDEDYKSENEPEDDEHTIEEDEALITEDERREELAALHNEVDLPLE 433
           C E  V++  N  + + D +SE+E EDDEHTIEEDEALIT++ER+EEL ALHNE+D+PLE
Sbjct: 196 CLEAQVDTADN--DDEYDVQSEDEVEDDEHTIEEDEALITKEERQEELEALHNEMDIPLE 253

Query: 432 ELLRRYAVGEASTXXXXXXXXXXXXXXXXGTPGKTEGVAEPTQASEDDSRCNGNDGSDHR 253
           ELL+RYAV +                   G    +E  A+P    E+     G D S   
Sbjct: 254 ELLKRYAVEK-------------------GGRESSENGAKPCANGEEHCESKGEDISAAC 294

Query: 252 SRRESSHPARS-RHCVESNGGLSVSENHHSEVKEHYIRKRKGLRE-ARKKHLELDFNDEN 79
               SS P  + R C E+NG L + +N+  E+  +  R +  + E   ++H+  DFNDE 
Sbjct: 295 EMEISSSPVNAGRRCGENNGALPIPDNNLLEIGAYETRNQLSISEDPAREHVPYDFNDEQ 354

Query: 78  EDGDFI 61
               FI
Sbjct: 355 ARYYFI 360


>emb|CAN80277.1| hypothetical protein VITISV_028854 [Vitis vinifera]
          Length = 526

 Score =  113 bits (282), Expect = 4e-23
 Identities = 71/154 (46%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
 Frame = -2

Query: 537 EDDEHTIEEDEALITEDERREELAALHNEVDLPLEELLRRYAVGEASTXXXXXXXXXXXX 358
           EDDEHTIEEDEALITE+ER+EEL ALHNE+DLPLEELL+RYA+ + S+            
Sbjct: 365 EDDEHTIEEDEALITEEERQEELEALHNEIDLPLEELLKRYAMKKVSS------------ 412

Query: 357 XXXXGTPGKTEGVAEPTQASEDDSRCNGNDGSDH-RSRRESSHPARSRHCVESNGGLSVS 181
                +  K E  AEPT   +D     G D SD  +  + SS     R C ESNG LS+S
Sbjct: 413 ---GSSQDKDEEEAEPTSVGDDHFGGEGQDLSDTCKIDKNSSLTVIGRRCGESNGSLSIS 469

Query: 180 ENHHSEVKEHYIRKRKGL-REARKKHLELDFNDE 82
           E+H  EV     +    + RE+ ++    DFNDE
Sbjct: 470 EHHLLEVDTCQAKNVSEISRESDEESKVYDFNDE 503


>ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|30984019|gb|AAP40633.1|
           photoperiod independent early flowering1 [Arabidopsis
           thaliana] gi|332641727|gb|AEE75248.1| helicase SWR1
           [Arabidopsis thaliana]
          Length = 2055

 Score =  107 bits (267), Expect = 2e-21
 Identities = 74/195 (37%), Positives = 100/195 (51%), Gaps = 3/195 (1%)
 Frame = -2

Query: 624 DVNGCAEPNVESQSNILETDEDYKSENEPEDDEHTIEEDEALITEDERREELAALHNEVD 445
           ++N  A   +ES S  L+ D D KSE+E EDDE TIEEDE   T+ ER+EEL AL NEVD
Sbjct: 195 EINSSA--GLESGSPELDEDYDLKSEDETEDDEDTIEEDEKHFTKRERQEELEALQNEVD 252

Query: 444 LPLEELLRRYAVGEAS---TXXXXXXXXXXXXXXXXGTPGKTEGVAEPTQASEDDSRCNG 274
           LP+EELLRRY  G  S   +                 +P K E         +D    +G
Sbjct: 253 LPVEELLRRYTSGRVSRETSPVKDENEDNLTSVSRVTSPVKDENQDNLASVGQD----HG 308

Query: 273 NDGSDHRSRRESSHPARSRHCVESNGGLSVSENHHSEVKEHYIRKRKGLREARKKHLELD 94
            D ++  +  E+      R   +S G L++SE H  +++           ++RK+    D
Sbjct: 309 EDKNNLAASEETEGNPSVRRSNDSYGHLAISETHSHDLEPGMTTASV---KSRKEDHTYD 365

Query: 93  FNDENEDGDFILANG 49
           FNDE ED DF+LANG
Sbjct: 366 FNDEQEDVDFVLANG 380


>dbj|BAB02425.1| helicase-like protein [Arabidopsis thaliana]
          Length = 2061

 Score =  107 bits (266), Expect = 3e-21
 Identities = 78/207 (37%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
 Frame = -2

Query: 624 DVNGCAEPNVESQSNILETDEDYKSENEPEDDEHTIEEDEALITEDERREELAALHNEVD 445
           ++N C    +ES S  L+ D D KSE+E EDDE TIEEDE   T+ ER+EEL AL NEVD
Sbjct: 195 EINSC----LESGSPELDEDYDLKSEDETEDDEDTIEEDEKHFTKRERQEELEALQNEVD 250

Query: 444 LPLEELLRRYAVGEASTXXXXXXXXXXXXXXXXGTPGKTE------GVAEPTQASEDDSR 283
           LP+EELLRRY  G  S                  +P K E       V+  T   +D+++
Sbjct: 251 LPVEELLRRYTSGRVSRET---------------SPVKDENEDNLTSVSRVTSPVKDENQ 295

Query: 282 CN-GNDGSDH--------RSRRESSHPARSRHCVESNGGLSVSENHHSEVKEHYIRKRKG 130
            N  + G DH         +  E+      R   +S G L++SE H  +++         
Sbjct: 296 DNLASVGQDHGEADKNNLAASEETEGNPSVRRSNDSYGHLAISETHSHDLEPGMTTASV- 354

Query: 129 LREARKKHLELDFNDENEDGDFILANG 49
             ++RK+    DFNDE ED DF+LANG
Sbjct: 355 --KSRKEDHTYDFNDEQEDVDFVLANG 379


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