BLASTX nr result

ID: Atractylodes22_contig00041178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041178
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-08
gb|AAU93581.1| Putative F-box protein, identical [Solanum demiss...    63   5e-08
gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]    61   1e-07
gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]    61   1e-07
gb|ABI34316.1| S haplotype-specific F-box protein, putative [Sol...    59   7e-07

>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
 Frame = -3

Query: 344 KKIKAELPLETIQFKLLPRLPAKSLGRFMCISKQWQSFLSTPEFARMHLHHVTMDESRAH 165
           KKI  +LP E I  ++L RLP K L RF C+SK W+S +S PEF + HL   T +++ A+
Sbjct: 3   KKIP-KLPSEIIS-EILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKR-TKEDTNAN 59

Query: 164 HKLLLLDTRSHTFRLCVLDCEAANRCSTTSRSIPFEAHPFG-MKILASLDGLVC 6
           H  + L T  H         +A +   TT    P     +  ++IL S +GLVC
Sbjct: 60  HYKIFLSTDPHLSIDPEAYFDADDNLLTTQLKFPVSYPEYSYIEILGSCNGLVC 113


>gb|AAU93581.1| Putative F-box protein, identical [Solanum demissum]
           gi|142942419|gb|ABO92994.1| F-box domain-containing
           protein [Solanum tuberosum]
          Length = 383

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
 Frame = -3

Query: 326 LPLETIQFKLLPRLPAKSLGRFMCISKQWQSFLSTPEFARMHLHHVTMDESRAHHKLLLL 147
           LP E I  ++L RLP KSL +FMC+SK W   +S+P F + H+     D+   +H+L+  
Sbjct: 11  LPDELIT-EILLRLPIKSLSKFMCVSKSWLQLISSPAFVKKHIKLTANDKGYIYHRLIFR 69

Query: 146 DTRSHTFRLCVLDCEAANRC---STTSRSIPFEAHPFGMKILASLDGLVCV 3
           +T ++ F+ C L     N+           P E       I+ S++GL+CV
Sbjct: 70  NT-NNDFKFCPLPPLFTNQQLIEEILHIDSPIERTTLSTHIVGSVNGLICV 119


>gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]
          Length = 386

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
 Frame = -3

Query: 326 LPLETIQFKLLPRLPAKSLGRFMCISKQWQSFLSTPEFARMHLHHVTMDESRAHHKLLLL 147
           LP E I  ++L +LP KSL +FMC+SK W   +S+P F + H+     D+   HH+L+  
Sbjct: 12  LPDELIT-EILLKLPVKSLSKFMCVSKSWLQLISSPTFVKNHIKLTADDKGYIHHRLIFR 70

Query: 146 DTRSHTFRLCVLDCEAANRCSTTSR---SIPFEAHPFGMKILASLDGLVCV 3
           +   + F+ C L      +  T        P E       I+ S++GL+CV
Sbjct: 71  NIDGN-FKFCSLPPLFTKQQHTEELFHIDSPIERSTLSTHIVGSVNGLICV 120


>gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 372

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
 Frame = -3

Query: 344 KKIKAELPLETIQFKLLPRLPAKSLGRFMCISKQWQSFLSTPEFARMHLHHVTMDESRAH 165
           + I + LP E I  ++L ++P KSL +FMC+SK W   +S+ +F + HL  +  D+  +H
Sbjct: 3   ESIISVLPHEII-IEILLKVPPKSLLKFMCVSKTWLELISSAKFIKTHLELIANDKEYSH 61

Query: 164 HKLLLLDTRSHTFRLCVLDCEAANRCSTTSRSI--PFEAHPFGMKILASLDGLVCV 3
           H+++  ++  + F++C L        ST    I  P E       I+ S++GL+C+
Sbjct: 62  HRIIFQESACN-FKVCCLPSMLNKERSTELFDIGSPMENPTIYTWIVGSVNGLICL 116


>gb|ABI34316.1| S haplotype-specific F-box protein, putative [Solanum demissum]
          Length = 190

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
 Frame = -3

Query: 344 KKIKAELPLETIQFKLLPRLPAKSLGRFMCISKQWQSFLSTPEFARMHLHHVTMDESRAH 165
           + I + LP E I+ ++L  LP KSL +F C+SK W   +S+ +F + HL     D+  +H
Sbjct: 3   ESIISVLPHEIIK-EILLNLPPKSLLKFRCVSKSWLELISSAKFIKNHLKQTANDKEYSH 61

Query: 164 HKLLLLDTRSHTFRLCVLDCEAANRCSTTSRSI--PFEAHPFGMKILASLDGLVCV 3
           H+++  ++  + F++C L        ST    I  P E       I+ S++GL+C+
Sbjct: 62  HRIIFQESACN-FKVCCLRSMLNKEQSTELFDIGSPMENPSIYTWIVGSVNGLICL 116


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