BLASTX nr result

ID: Atractylodes22_contig00041109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041109
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]   144   7e-33
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]   140   8e-32
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]   139   3e-31
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   118   6e-25
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...   117   1e-24

>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
          Length = 1378

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/134 (51%), Positives = 96/134 (71%), Gaps = 2/134 (1%)
 Frame = +1

Query: 1   LTSWLYRVEQFFHLDNTPDAARVKLTAIHLEDKALQWHQTFMKNRG-DSQLTWADYSEAL 177
           L  WL RVE FF +D TP  ARV+L A+HLE KA+QWHQ ++K RG ++ L W++Y  AL
Sbjct: 139 LDGWLLRVEYFFEVDRTPPEARVRLAALHLEGKAIQWHQGYIKTRGNEAYLDWSEYVIAL 198

Query: 178 TARFGR-LFDDPMSELKNLRQTTTIKEYHDSFDSIINRLQLSPEYTLSCFLAGLEEEIQL 354
            ARFG+ +FDDP+++L+NLRQT +++ Y D FD +  R  +   + LS FL+GL +E+Q+
Sbjct: 199 NARFGQHVFDDPIADLRNLRQTGSLQSYMDEFDELYPRADIKESHALSFFLSGLIDELQM 258

Query: 355 QVRMFNPQTLQQAF 396
            VRMF PQTL  A+
Sbjct: 259 PVRMFKPQTLADAY 272


>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
          Length = 1371

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/134 (50%), Positives = 95/134 (70%), Gaps = 2/134 (1%)
 Frame = +1

Query: 1   LTSWLYRVEQFFHLDNTPDAARVKLTAIHLEDKALQWHQTFMKNRG-DSQLTWADYSEAL 177
           L  WL RVE FF +D TP  ARV+L A+HLE KA+QWHQ ++K RG ++ L W++Y  AL
Sbjct: 87  LDGWLLRVEYFFEVDRTPPEARVRLAALHLEGKAIQWHQGYIKTRGNEAYLDWSEYVIAL 146

Query: 178 TARFGR-LFDDPMSELKNLRQTTTIKEYHDSFDSIINRLQLSPEYTLSCFLAGLEEEIQL 354
            ARFG+ +F+DP+++L+NLRQT +++ Y D FD +  R  +   + LS FL+ L +E+Q+
Sbjct: 147 NARFGQHVFBDPIADLRNLRQTGSLQSYMDEFDELYPRADIKESHALSFFLSXLIDELQM 206

Query: 355 QVRMFNPQTLQQAF 396
            VRMF PQTL  A+
Sbjct: 207 PVRMFKPQTLADAY 220


>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
          Length = 1412

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/134 (50%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
 Frame = +1

Query: 1   LTSWLYRVEQFFHLDNTPDAARVKLTAIHLEDKALQWHQTFMKNRG-DSQLTWADYSEAL 177
           L  WL RVE FF +D TP  ARV+L A+HLE KA+QWHQ ++K RG ++ L W++   AL
Sbjct: 87  LDGWLLRVEYFFEVDRTPPEARVRLAALHLEGKAIQWHQGYIKTRGNEAYLDWSEXVIAL 146

Query: 178 TARFGR-LFDDPMSELKNLRQTTTIKEYHDSFDSIINRLQLSPEYTLSCFLAGLEEEIQL 354
            ARFG+ +FDDP+++L+NLRQT +++ Y D FD +  R  +   + LS FL+GL +E+ +
Sbjct: 147 NARFGQHVFDDPIADLRNLRQTGSLQSYMDEFDELYPRADIKESHALSFFLSGLIDELXM 206

Query: 355 QVRMFNPQTLQQAF 396
            VRMF PQTL  A+
Sbjct: 207 PVRMFKPQTLADAY 220


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
           thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/131 (43%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
 Frame = +1

Query: 1   LTSWLYRVEQFFHLDNTPDAARVKLTAIHLEDKALQWHQTFMKNRGDSQLT--WADYSEA 174
           L  WL++VE+FF +D+TP+  +VK+ AIH +  A  WHQ+F+++    ++   W  Y + 
Sbjct: 122 LKEWLFKVEEFFGVDSTPEDMKVKMAAIHFDSHASTWHQSFIQSGVGLEVLYDWKGYVKL 181

Query: 175 LTARFGRLFDDPMSELKNLRQTTTIKEYHDSFDSIINRLQLSPEYTLSCFLAGLEEEIQL 354
           L  RF    DDPM+ELK+L++T  I +YH  F+ I  R+ LS EY +S +LAGL  + Q+
Sbjct: 182 LKERFEDDCDDPMAELKHLQETDGIIDYHQKFELIKTRVNLSEEYLVSVYLAGLRTDTQM 241

Query: 355 QVRMFNPQTLQ 387
            VRMF PQT++
Sbjct: 242 HVRMFQPQTVR 252


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/131 (43%), Positives = 83/131 (63%), Gaps = 2/131 (1%)
 Frame = +1

Query: 1   LTSWLYRVEQFFHLDNTPDAARVKLTAIHLEDKALQWHQTFMKNRG--DSQLTWADYSEA 174
           +  WL++VE+FF +D TP+  +VK+ AIH +  A  WH +F+++    D    W +Y + 
Sbjct: 127 INEWLFKVEEFFGVDFTPEEMKVKMVAIHFDSHAATWHHSFIQSGIGLDVFFNWPEYVKL 186

Query: 175 LTARFGRLFDDPMSELKNLRQTTTIKEYHDSFDSIINRLQLSPEYTLSCFLAGLEEEIQL 354
           L  RF    DDPM+ELK L++T  I EYH  F+ I  RL LS EY +S +LAGL  + Q+
Sbjct: 187 LKDRFEDACDDPMAELKKLQETDGIVEYHQQFELIKVRLNLSEEYLVSVYLAGLRTDTQM 246

Query: 355 QVRMFNPQTLQ 387
            VRMF P+T++
Sbjct: 247 HVRMFEPKTVR 257


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