BLASTX nr result

ID: Atractylodes22_contig00041105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041105
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301951.1| predicted protein [Populus trichocarpa] gi|2...    63   7e-08
ref|XP_003527526.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...    62   1e-07
ref|XP_002510592.1| ring finger protein, putative [Ricinus commu...    60   6e-07
ref|XP_003523302.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...    59   8e-07
ref|XP_003589558.1| RING finger protein [Medicago truncatula] gi...    59   1e-06

>ref|XP_002301951.1| predicted protein [Populus trichocarpa] gi|222843677|gb|EEE81224.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 27/43 (62%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
 Frame = +3

Query: 183 CNHGFHVQCADTWLSKNPVWPVCWNKLDTNF---FVPPETTPC 302
           CNHGFH++CADTWLSK+PV PVC  KLD  F      PE  PC
Sbjct: 123 CNHGFHLECADTWLSKHPVCPVCRAKLDAQFSSTSASPENNPC 165


>ref|XP_003527526.1| PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Glycine max]
          Length = 130

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 26/40 (65%), Positives = 29/40 (72%)
 Frame = +3

Query: 183 CNHGFHVQCADTWLSKNPVWPVCWNKLDTNFFVPPETTPC 302
           CNHGFHVQCADTWLSK+P+ PVC  KLD   F     +PC
Sbjct: 93  CNHGFHVQCADTWLSKHPICPVCRTKLDPQIFT--SQSPC 130


>ref|XP_002510592.1| ring finger protein, putative [Ricinus communis]
           gi|223551293|gb|EEF52779.1| ring finger protein,
           putative [Ricinus communis]
          Length = 175

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = +3

Query: 183 CNHGFHVQCADTWLSKNPVWPVCWNKLDTNFFVPPETTPC 302
           CNHGFH++CADTWLS + V PVC  KLD+ FF      PC
Sbjct: 136 CNHGFHLECADTWLSNHSVCPVCRAKLDSQFFNASTDNPC 175


>ref|XP_003523302.1| PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Glycine max]
          Length = 131

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 25/40 (62%), Positives = 28/40 (70%)
 Frame = +3

Query: 183 CNHGFHVQCADTWLSKNPVWPVCWNKLDTNFFVPPETTPC 302
           CNHGFHV CADTWLSK+P+ PVC  KLD   F     +PC
Sbjct: 94  CNHGFHVHCADTWLSKHPLCPVCRTKLDPQIFT--SQSPC 131


>ref|XP_003589558.1| RING finger protein [Medicago truncatula]
           gi|355478606|gb|AES59809.1| RING finger protein
           [Medicago truncatula]
          Length = 189

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +3

Query: 183 CNHGFHVQCADTWLSKNPVWPVCWNKLDTNFFVP 284
           CNH FH++CADTWLSK P+ PVC  KLD   F+P
Sbjct: 90  CNHAFHLECADTWLSKQPICPVCRAKLDPTLFIP 123


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