BLASTX nr result

ID: Atractylodes22_contig00041007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041007
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]            64   2e-08
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    61   1e-07
emb|CAN77739.1| hypothetical protein VITISV_043316 [Vitis vinifera]    60   1e-07
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    60   1e-07
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    60   2e-07

>dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]
          Length = 556

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/63 (49%), Positives = 40/63 (63%)
 Frame = +1

Query: 10  YFTLKDVLYIPDFQFNLISVSALTLNRGLLVCFHHDYVVIQDSINRRTIGKAKNIGELYV 189
           +  L +VLYIPDF+ NL+ VS LT + G  V F  DY +IQD +    IG+ + I  LYV
Sbjct: 439 FLVLNNVLYIPDFRLNLLCVSQLTKDLGYRVTFDEDYCLIQDHVKGLMIGRGEQINNLYV 498

Query: 190 LDV 198
           LDV
Sbjct: 499 LDV 501


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/75 (44%), Positives = 47/75 (62%)
 Frame = +1

Query: 10  YFTLKDVLYIPDFQFNLISVSALTLNRGLLVCFHHDYVVIQDSINRRTIGKAKNIGELYV 189
           + TL +VLYIP+F+ NL+S+S+LT + G  V F      IQD     TIG+ + +  LYV
Sbjct: 440 HITLHNVLYIPEFRLNLLSISSLTSDIGSQVIFDVSSCAIQDPTKGWTIGQGRRVANLYV 499

Query: 190 LDVEDSALMAKVNNV 234
           LDV+ S +  K+N V
Sbjct: 500 LDVKSSPM--KINAV 512


>emb|CAN77739.1| hypothetical protein VITISV_043316 [Vitis vinifera]
          Length = 548

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/62 (48%), Positives = 41/62 (66%)
 Frame = +1

Query: 10  YFTLKDVLYIPDFQFNLISVSALTLNRGLLVCFHHDYVVIQDSINRRTIGKAKNIGELYV 189
           +FTL++VLY+P F+FNLI +SALT +    V F  +   IQD + R+ IG  +  G LYV
Sbjct: 140 HFTLENVLYVPQFRFNLILISALTQSHCCFVKFEFESCFIQDRMQRQMIGIGRRDGNLYV 199

Query: 190 LD 195
           LD
Sbjct: 200 LD 201


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/60 (51%), Positives = 39/60 (65%)
 Frame = +1

Query: 16  TLKDVLYIPDFQFNLISVSALTLNRGLLVCFHHDYVVIQDSINRRTIGKAKNIGELYVLD 195
           TLK+VLYIP+F+ NL+SVS  T +    + F  D  VIQD I  + IG+   IG LYVLD
Sbjct: 497 TLKNVLYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRGNQIGGLYVLD 556


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/65 (46%), Positives = 42/65 (64%)
 Frame = +1

Query: 19  LKDVLYIPDFQFNLISVSALTLNRGLLVCFHHDYVVIQDSINRRTIGKAKNIGELYVLDV 198
           L++VL+IP+F+ NLIS+S+LT + G  V F      IQD     T+G+ K IG LYVLD 
Sbjct: 494 LQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLDT 553

Query: 199 EDSAL 213
           +  A+
Sbjct: 554 QSPAI 558


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