BLASTX nr result
ID: Atractylodes22_contig00041000
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00041000
(296 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI37903.3| unnamed protein product [Vitis vinifera] 152 2e-35
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi... 152 2e-35
ref|XP_002528283.1| pentatricopeptide repeat-containing protein,... 146 2e-33
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi... 136 2e-30
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi... 136 2e-30
>emb|CBI37903.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 152 bits (385), Expect = 2e-35
Identities = 70/97 (72%), Positives = 85/97 (87%)
Frame = -2
Query: 295 FDDMPEKNPISWTSLIAGYSRYGFGHEALELFTEMMARRVKPNQFTFSSVLCACAGIASI 116
F +MPEKNP+SWT+LI+GY+R G GH+ALELFT+MM V+P+QFTFSS LCACA IAS+
Sbjct: 281 FVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASL 340
Query: 115 KNGKQIHAFLVRTRFTPNTIVVSSLIDMYSKCGDLGL 5
K+GKQIHA+L+R F PNTIVVS+LIDMYSKCG LG+
Sbjct: 341 KHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGI 377
Score = 73.6 bits (179), Expect = 2e-11
Identities = 31/96 (32%), Positives = 57/96 (59%)
Frame = -2
Query: 295 FDDMPEKNPISWTSLIAGYSRYGFGHEALELFTEMMARRVKPNQFTFSSVLCACAGIASI 116
FD MPEK+ +SW +++ +++ G+ EAL ++E ++ N F+F+ VL C + +
Sbjct: 149 FDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEV 208
Query: 115 KNGKQIHAFLVRTRFTPNTIVVSSLIDMYSKCGDLG 8
+Q+H ++ F N ++ SS++D Y KCG +G
Sbjct: 209 GLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMG 244
>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 152 bits (385), Expect = 2e-35
Identities = 70/97 (72%), Positives = 85/97 (87%)
Frame = -2
Query: 295 FDDMPEKNPISWTSLIAGYSRYGFGHEALELFTEMMARRVKPNQFTFSSVLCACAGIASI 116
F +MPEKNP+SWT+LI+GY+R G GH+ALELFT+MM V+P+QFTFSS LCACA IAS+
Sbjct: 281 FVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASL 340
Query: 115 KNGKQIHAFLVRTRFTPNTIVVSSLIDMYSKCGDLGL 5
K+GKQIHA+L+R F PNTIVVS+LIDMYSKCG LG+
Sbjct: 341 KHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGI 377
Score = 73.6 bits (179), Expect = 2e-11
Identities = 31/96 (32%), Positives = 57/96 (59%)
Frame = -2
Query: 295 FDDMPEKNPISWTSLIAGYSRYGFGHEALELFTEMMARRVKPNQFTFSSVLCACAGIASI 116
FD MPEK+ +SW +++ +++ G+ EAL ++E ++ N F+F+ VL C + +
Sbjct: 149 FDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEV 208
Query: 115 KNGKQIHAFLVRTRFTPNTIVVSSLIDMYSKCGDLG 8
+Q+H ++ F N ++ SS++D Y KCG +G
Sbjct: 209 GLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMG 244
>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 602
Score = 146 bits (368), Expect = 2e-33
Identities = 68/95 (71%), Positives = 81/95 (85%)
Frame = -2
Query: 295 FDDMPEKNPISWTSLIAGYSRYGFGHEALELFTEMMARRVKPNQFTFSSVLCACAGIASI 116
FD MPEKNP++WTSLIAGY+R+ GH+ALELFT+MMA ++P+QFTFSS LCA A IAS+
Sbjct: 272 FDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASL 331
Query: 115 KNGKQIHAFLVRTRFTPNTIVVSSLIDMYSKCGDL 11
+GKQIH +L+RT PNTIVVSSLIDMYSKCG L
Sbjct: 332 NHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCL 366
Score = 75.9 bits (185), Expect = 3e-12
Identities = 30/96 (31%), Positives = 59/96 (61%)
Frame = -2
Query: 295 FDDMPEKNPISWTSLIAGYSRYGFGHEALELFTEMMARRVKPNQFTFSSVLCACAGIASI 116
FD MPEK+ +SW +++ Y++ GF ++AL + E+ + N+++F+ +L C + +
Sbjct: 140 FDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKEL 199
Query: 115 KNGKQIHAFLVRTRFTPNTIVVSSLIDMYSKCGDLG 8
+ KQ H ++ F N ++ SS++D Y+KC ++G
Sbjct: 200 ELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMG 235
>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 136 bits (342), Expect = 2e-30
Identities = 62/95 (65%), Positives = 77/95 (81%)
Frame = -2
Query: 295 FDDMPEKNPISWTSLIAGYSRYGFGHEALELFTEMMARRVKPNQFTFSSVLCACAGIASI 116
F MPEKNP+SW++LI+GY+R GHEAL+ FT+MM + P Q+TFSS LCACA IA++
Sbjct: 284 FHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAAL 343
Query: 115 KNGKQIHAFLVRTRFTPNTIVVSSLIDMYSKCGDL 11
K+GKQ+H +L+RT F NTIVVSSLIDMYSKCG L
Sbjct: 344 KHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGML 378
Score = 72.0 bits (175), Expect = 5e-11
Identities = 32/98 (32%), Positives = 58/98 (59%)
Frame = -2
Query: 295 FDDMPEKNPISWTSLIAGYSRYGFGHEALELFTEMMARRVKPNQFTFSSVLCACAGIASI 116
FD M EK+ +SW +++ Y++ G +EA+ L+ + + N F+F+ VL C + +
Sbjct: 152 FDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKEL 211
Query: 115 KNGKQIHAFLVRTRFTPNTIVVSSLIDMYSKCGDLGLA 2
+ KQ+H ++ F N ++ SS++D YSKCG++ A
Sbjct: 212 QLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCA 249
>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 136 bits (342), Expect = 2e-30
Identities = 62/95 (65%), Positives = 77/95 (81%)
Frame = -2
Query: 295 FDDMPEKNPISWTSLIAGYSRYGFGHEALELFTEMMARRVKPNQFTFSSVLCACAGIASI 116
F MPEKNP+SW++LI+GY+R GHEAL+ FT+MM + P Q+TFSS LCACA IA++
Sbjct: 284 FHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAAL 343
Query: 115 KNGKQIHAFLVRTRFTPNTIVVSSLIDMYSKCGDL 11
K+GKQ+H +L+RT F NTIVVSSLIDMYSKCG L
Sbjct: 344 KHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGML 378
Score = 70.9 bits (172), Expect = 1e-10
Identities = 31/98 (31%), Positives = 58/98 (59%)
Frame = -2
Query: 295 FDDMPEKNPISWTSLIAGYSRYGFGHEALELFTEMMARRVKPNQFTFSSVLCACAGIASI 116
FD M EK+ +SW +++ Y++ G +EA+ L+ + + N F+F+ VL C + +
Sbjct: 152 FDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKEL 211
Query: 115 KNGKQIHAFLVRTRFTPNTIVVSSLIDMYSKCGDLGLA 2
+ KQ+H ++ F N ++ SS++D Y+KCG++ A
Sbjct: 212 QLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCA 249