BLASTX nr result

ID: Atractylodes22_contig00040953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040953
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305644.1| predicted protein [Populus trichocarpa] gi|1...   162   1e-37
ref|XP_002524706.1| cyclin d, putative [Ricinus communis] gi|223...   153   4e-35
ref|XP_002267937.2| PREDICTED: putative cyclin-D6-1-like, partia...   143   4e-32
emb|CBI40871.3| unnamed protein product [Vitis vinifera]              143   4e-32
ref|XP_002316670.1| predicted protein [Populus trichocarpa] gi|1...   142   9e-32

>ref|XP_002305644.1| predicted protein [Populus trichocarpa]
           gi|159025731|emb|CAN88866.1| D6-type cyclin [Populus
           trichocarpa] gi|222848608|gb|EEE86155.1| predicted
           protein [Populus trichocarpa]
          Length = 305

 Score =  162 bits (409), Expect = 1e-37
 Identities = 100/205 (48%), Positives = 128/205 (62%), Gaps = 27/205 (13%)
 Frame = -1

Query: 828 LVAISCLSLAVKMKNSDLAIPKLAGYEC-WIYDAKSISRMELVILTSLKWRMRSITPXXX 652
           LV ISCLSLA KMKN+  ++    G E  +I+D ++I+RMEL+IL +L WRMRSITP   
Sbjct: 97  LVVISCLSLAAKMKNAHFSVSDFQGEEAGFIFDTQTINRMELLILDALNWRMRSITPFSF 156

Query: 651 XXXXXXXXXXEDP---QAIKDRASQIILKSIYGIKFLEFRPSVIAASALLHASQDLIPLQ 481
                     +DP   Q +KDRA++II K+   IKFLEF+PS++AASALL AS +L+PLQ
Sbjct: 157 VHFFISVLELKDPSSSQPLKDRATEIIFKAQNEIKFLEFKPSIVAASALLVASNELLPLQ 216

Query: 480 HSQFRAAISSCKYLNKESLEECLGIMQDMA--------LDTKEST----SVLDHQCTSSE 337
              F+ +ISSC ++NKE L  C   +Q+M         LDT   T    SVLD QCT SE
Sbjct: 217 FPLFKCSISSCAFVNKEKLLSCFNAVQEMVEMEWYESMLDTMSCTRTPLSVLDRQCTKSE 276

Query: 336 SE--------NGTS---IKRRRLNG 295
           SE        NG++   IKRRRLNG
Sbjct: 277 SETTSTTSINNGSTVPEIKRRRLNG 301


>ref|XP_002524706.1| cyclin d, putative [Ricinus communis] gi|223536067|gb|EEF37725.1|
           cyclin d, putative [Ricinus communis]
          Length = 305

 Score =  153 bits (387), Expect = 4e-35
 Identities = 93/186 (50%), Positives = 119/186 (63%), Gaps = 15/186 (8%)
 Frame = -1

Query: 828 LVAISCLSLAVKMKNSDLAIPKLAGYECWIYDAKSISRMELVILTSLKWRMRSITPXXXX 649
           L+AISCLSLA KMK++   +  L   E + +D +++SRMEL+IL +L WRMRSITP    
Sbjct: 97  LLAISCLSLAAKMKDTHFPLSNLQREESFNFDMQTVSRMELLILGALNWRMRSITPFSFL 156

Query: 648 XXXXXXXXXEDP---QAIKDRASQIILKSIYGIKFLEFRPSVIAASALLHASQDLIPLQH 478
                    +DP   QA+KDRA++II K+ + IK LEFRPSVIAASALL AS +L PLQ+
Sbjct: 157 HFFISLFELKDPPLTQALKDRATEIIFKAHHEIKLLEFRPSVIAASALLVASHELFPLQY 216

Query: 477 SQFRAAISSCKYLNKESLEECLGIMQDMA--------LDTKEST----SVLDHQCTSSES 334
             F+ +I SC+ +NKE+L  CL  +Q M         LDT  ST    S+LD  CT SES
Sbjct: 217 PSFKCSIFSCECVNKENLLRCLNALQQMVEMVWYESMLDTVSSTRTPLSILDRHCTKSES 276

Query: 333 ENGTSI 316
           E  TSI
Sbjct: 277 ET-TSI 281


>ref|XP_002267937.2| PREDICTED: putative cyclin-D6-1-like, partial [Vitis vinifera]
          Length = 327

 Score =  143 bits (361), Expect = 4e-32
 Identities = 84/186 (45%), Positives = 113/186 (60%), Gaps = 16/186 (8%)
 Frame = -1

Query: 828 LVAISCLSLAVKMKNSDLAIPKLAGYECWIYDAKSISRMELVILTSLKWRMRSITPXXXX 649
           L+ ISCLSLA KMK  D +       E +I+DA+ I RMEL+IL++L WRMRSITP    
Sbjct: 85  LLVISCLSLAAKMKKIDFSYSDFQKDEGFIFDAQRIHRMELLILSTLNWRMRSITPFSFV 144

Query: 648 XXXXXXXXXEDP---QAIKDRASQIILKSIYGIKFLEFRPSVIAASALLHASQDLIPLQH 478
                    +DP   +A+KDRA+++I K+   IK LE++PS+IAASALL AS +L PLQ 
Sbjct: 145 YFFISLFELKDPALTKALKDRATELIFKARDEIKLLEYKPSIIAASALLCASYELFPLQF 204

Query: 477 SQFRAAISSCKYLNKESLEECLGIMQDMALD-------------TKESTSVLDHQCTSSE 337
           S F+AAISSC+Y+N+ESL  C  +M++M  +             TK    VLD    +S 
Sbjct: 205 SSFKAAISSCEYINQESLNNCYHVMEEMVTNEWDESIFDAAVSSTKTPICVLDRHYKNSV 264

Query: 336 SENGTS 319
           SE   +
Sbjct: 265 SEKSNT 270


>emb|CBI40871.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  143 bits (361), Expect = 4e-32
 Identities = 84/186 (45%), Positives = 113/186 (60%), Gaps = 16/186 (8%)
 Frame = -1

Query: 828 LVAISCLSLAVKMKNSDLAIPKLAGYECWIYDAKSISRMELVILTSLKWRMRSITPXXXX 649
           L+ ISCLSLA KMK  D +       E +I+DA+ I RMEL+IL++L WRMRSITP    
Sbjct: 168 LLVISCLSLAAKMKKIDFSYSDFQKDEGFIFDAQRIHRMELLILSTLNWRMRSITPFSFV 227

Query: 648 XXXXXXXXXEDP---QAIKDRASQIILKSIYGIKFLEFRPSVIAASALLHASQDLIPLQH 478
                    +DP   +A+KDRA+++I K+   IK LE++PS+IAASALL AS +L PLQ 
Sbjct: 228 YFFISLFELKDPALTKALKDRATELIFKARDEIKLLEYKPSIIAASALLCASYELFPLQF 287

Query: 477 SQFRAAISSCKYLNKESLEECLGIMQDMALD-------------TKESTSVLDHQCTSSE 337
           S F+AAISSC+Y+N+ESL  C  +M++M  +             TK    VLD    +S 
Sbjct: 288 SSFKAAISSCEYINQESLNNCYHVMEEMVTNEWDESIFDAAVSSTKTPICVLDRHYKNSV 347

Query: 336 SENGTS 319
           SE   +
Sbjct: 348 SEKSNT 353


>ref|XP_002316670.1| predicted protein [Populus trichocarpa]
           gi|159025733|emb|CAN88867.1| D6-type cyclin [Populus
           trichocarpa] gi|222859735|gb|EEE97282.1| predicted
           protein [Populus trichocarpa]
          Length = 309

 Score =  142 bits (358), Expect = 9e-32
 Identities = 93/209 (44%), Positives = 123/209 (58%), Gaps = 31/209 (14%)
 Frame = -1

Query: 828 LVAISCLSLAVKMKNSDLAIPKLAGYEC-WIYDAKSISRMELVILTSLKWRMRSITPXXX 652
           L+ ISCLSLA KMKN   +I      E  +I+D ++I+RMEL++L +L WRMRSITP   
Sbjct: 97  LLVISCLSLAAKMKNKHFSISNSQEAEAGFIFDTQTINRMELLVLDALNWRMRSITPFSF 156

Query: 651 XXXXXXXXXXEDP---QAIKDRASQIILKSIYGIKFLEFRPSVIAASALLHASQDLIPLQ 481
                     +DP   Q +KDRA++II K+   IKFLEF+PS+IAASALL AS +  PLQ
Sbjct: 157 VHFFVSLFELKDPSSSQPLKDRATEIIFKAQNEIKFLEFKPSIIAASALLVASNERFPLQ 216

Query: 480 HSQFRAAISSCKYLNKESLEECLGIMQDMA--------LDTKEST----SVLDHQCTSSE 337
              F+ +I SC+++N+E L EC   +Q+M         LDT   T    SVLD   T SE
Sbjct: 217 FPCFKCSIYSCEFVNEEKLLECFNALQEMVEMEWYESMLDTMSWTRTPLSVLDRHFTKSE 276

Query: 336 SE------------NGTS---IKRRRLNG 295
           +E            NG++   IKRR+LNG
Sbjct: 277 NETTSIITSTTTITNGSTVPEIKRRKLNG 305


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