BLASTX nr result

ID: Atractylodes22_contig00040902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040902
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154854.1| PREDICTED: AP-4 complex subunit mu-1-like [C...   141   6e-32
ref|XP_004147850.1| PREDICTED: LOW QUALITY PROTEIN: AP-4 complex...   141   6e-32
ref|XP_002281307.1| PREDICTED: AP-4 complex subunit mu-1 [Vitis ...   140   8e-32
ref|XP_002302340.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
gb|ACJ85581.1| unknown [Medicago truncatula] gi|388500272|gb|AFK...   138   4e-31

>ref|XP_004154854.1| PREDICTED: AP-4 complex subunit mu-1-like [Cucumis sativus]
          Length = 451

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/73 (90%), Positives = 70/73 (95%)
 Frame = +3

Query: 27  MISQFFVLSLRGDNIVFRDYRGDVQKGSAEVFFRKVKFWKEDGEGEAPPVFNVDGVNYFH 206
           MISQFFVLS RGDNIVFRDYRG+V KGSAE+FFRKVKFWKEDGEG+APPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 207 AKVVGLLFVATTR 245
            KVVGLLFVATTR
Sbjct: 61  VKVVGLLFVATTR 73


>ref|XP_004147850.1| PREDICTED: LOW QUALITY PROTEIN: AP-4 complex subunit mu-1-like
           [Cucumis sativus]
          Length = 451

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/73 (90%), Positives = 70/73 (95%)
 Frame = +3

Query: 27  MISQFFVLSLRGDNIVFRDYRGDVQKGSAEVFFRKVKFWKEDGEGEAPPVFNVDGVNYFH 206
           MISQFFVLS RGDNIVFRDYRG+V KGSAE+FFRKVKFWKEDGEG+APPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 207 AKVVGLLFVATTR 245
            KVVGLLFVATTR
Sbjct: 61  VKVVGLLFVATTR 73


>ref|XP_002281307.1| PREDICTED: AP-4 complex subunit mu-1 [Vitis vinifera]
           gi|302142544|emb|CBI19747.3| unnamed protein product
           [Vitis vinifera]
          Length = 451

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/73 (90%), Positives = 69/73 (94%)
 Frame = +3

Query: 27  MISQFFVLSLRGDNIVFRDYRGDVQKGSAEVFFRKVKFWKEDGEGEAPPVFNVDGVNYFH 206
           MISQFFVLS RGDNIVFRDYRG+V KGSAE+FFRKVKFWKEDGEG+APPVFNVDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH 60

Query: 207 AKVVGLLFVATTR 245
            KV GLLFVATTR
Sbjct: 61  VKVAGLLFVATTR 73


>ref|XP_002302340.1| predicted protein [Populus trichocarpa] gi|222844066|gb|EEE81613.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/73 (91%), Positives = 69/73 (94%)
 Frame = +3

Query: 27  MISQFFVLSLRGDNIVFRDYRGDVQKGSAEVFFRKVKFWKEDGEGEAPPVFNVDGVNYFH 206
           MISQFFVLS RGDNIVFRDYRG+V KGSAE+FFRKVKFWKEDGE EAPPVFNVDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEEEAPPVFNVDGVNYFH 60

Query: 207 AKVVGLLFVATTR 245
            KVVGLLFVATTR
Sbjct: 61  VKVVGLLFVATTR 73


>gb|ACJ85581.1| unknown [Medicago truncatula] gi|388500272|gb|AFK38202.1| unknown
           [Medicago truncatula]
          Length = 442

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/73 (89%), Positives = 68/73 (93%)
 Frame = +3

Query: 27  MISQFFVLSLRGDNIVFRDYRGDVQKGSAEVFFRKVKFWKEDGEGEAPPVFNVDGVNYFH 206
           MISQFFVLS RGDNIVFRDYRG+VQKGSAE FFRKVKFWKED +G+APPVFNVDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVQKGSAETFFRKVKFWKEDADGDAPPVFNVDGVNYFH 60

Query: 207 AKVVGLLFVATTR 245
            KV GLLFVATTR
Sbjct: 61  VKVAGLLFVATTR 73


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