BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040897
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat...   119   3e-25
ref|XP_002879469.1| pentatricopeptide repeat-containing protein ...   117   1e-24
ref|NP_180932.1| pentatricopeptide repeat-containing protein [Ar...   116   2e-24
gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsu...   115   3e-24
ref|XP_002318172.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24

>ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Vitis vinifera]
          Length = 615

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/119 (45%), Positives = 87/119 (73%)
 Frame = +3

Query: 6   GELGFARQLFDNMPMKKAVSCNALMAGFVLAEKFDDALSLFIEMKKLGIRADSMTMVGVL 185
           G++GFAR+LFD M  K  ++ NA+++G+V   +  +ALSLF  M++ G++ + ++MV VL
Sbjct: 191 GDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVL 250

Query: 186 QSCASLGALQQGRWVHEQVIRSQMGINMYLGAALINMYARCGNLVKAQEIFDSLQEKNL 362
            +C+ LGAL QGRW H  + R+++ + + LG ALI+MYA+CGN+ KA E+F  ++EKN+
Sbjct: 251 SACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNV 309


>ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325308|gb|EFH55728.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 583

 Score =  117 bits (293), Expect = 1e-24
 Identities = 51/120 (42%), Positives = 82/120 (68%)
 Frame = +3

Query: 3   CGELGFARQLFDNMPMKKAVSCNALMAGFVLAEKFDDALSLFIEMKKLGIRADSMTMVGV 182
           CG++  ARQ+FD MP K  V+ N+L++GF      +DA+ +F +M++ G   DS T V +
Sbjct: 155 CGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSL 214

Query: 183 LQSCASLGALQQGRWVHEQVIRSQMGINMYLGAALINMYARCGNLVKAQEIFDSLQEKNL 362
           L +CA  GA+  G WVH+ ++   + +N+ LG ALIN+Y+RCG++ KA+E+FD ++E N+
Sbjct: 215 LSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/117 (25%), Positives = 62/117 (52%)
 Frame = +3

Query: 12  LGFARQLFDNMPMKKAVSCNALMAGFVLAEKFDDALSLFIEMKKLGIRADSMTMVGVLQS 191
           + +   LF ++P+      N+++            ++ +  M    +   + T   V++S
Sbjct: 57  IAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKS 116

Query: 192 CASLGALQQGRWVHEQVIRSQMGINMYLGAALINMYARCGNLVKAQEIFDSLQEKNL 362
           CA L AL+ G+ VH   + S  G++ Y+ AAL+  Y++CG++  A+++FD + EK++
Sbjct: 117 CADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSV 173


>ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75101013|sp|P93011.1|PP182_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g33760 gi|1707020|gb|AAC69141.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253787|gb|AEC08881.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 583

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/120 (43%), Positives = 82/120 (68%)
 Frame = +3

Query: 3   CGELGFARQLFDNMPMKKAVSCNALMAGFVLAEKFDDALSLFIEMKKLGIRADSMTMVGV 182
           CG++  ARQ+FD MP K  V+ N+L++GF      D+A+ +F +M++ G   DS T V +
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214

Query: 183 LQSCASLGALQQGRWVHEQVIRSQMGINMYLGAALINMYARCGNLVKAQEIFDSLQEKNL 362
           L +CA  GA+  G WVH+ +I   + +N+ LG ALIN+Y+RCG++ KA+E+FD ++E N+
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/117 (25%), Positives = 62/117 (52%)
 Frame = +3

Query: 12  LGFARQLFDNMPMKKAVSCNALMAGFVLAEKFDDALSLFIEMKKLGIRADSMTMVGVLQS 191
           + +   LF ++P+      N+++            ++ +  M    +   + T   V++S
Sbjct: 57  IAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKS 116

Query: 192 CASLGALQQGRWVHEQVIRSQMGINMYLGAALINMYARCGNLVKAQEIFDSLQEKNL 362
           CA L AL+ G+ VH   + S  G++ Y+ AAL+  Y++CG++  A+++FD + EK++
Sbjct: 117 CADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSI 173


>gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227463002|gb|ACP39953.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 592

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/119 (44%), Positives = 83/119 (69%)
 Frame = +3

Query: 6   GELGFARQLFDNMPMKKAVSCNALMAGFVLAEKFDDALSLFIEMKKLGIRADSMTMVGVL 185
           G +  AR++FD MP K  V+ N++++G+       +A+ LF  M+ LG++ DS T V +L
Sbjct: 167 GHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLL 226

Query: 186 QSCASLGALQQGRWVHEQVIRSQMGINMYLGAALINMYARCGNLVKAQEIFDSLQEKNL 362
            +CA +GA+  G WVHE + R+   +N+ LG AL+NMY+RCGN+ KA+E+FDS++EKN+
Sbjct: 227 SACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNI 285



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3   CGELGFARQLFDNMPMKKAVSCNALMAGFVLAEKFDDALSLFIEMKKLGIRADSMTMVGV 182
           CG +  AR++FD+M  K  V+  A+++G+ +      A+ LF EM   G R +++T V V
Sbjct: 267 CGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAV 326

Query: 183 LQSCASLGALQQGRWVHEQVIRSQMGI--NMYLGAALINMYARCGNLVKAQEIFDSLQEK 356
           L +CA  G + +GR +    ++ + G+  ++     +++M  R G+L +A +   +   K
Sbjct: 327 LSACAHAGLVDEGRQIF-TTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPK 385


>ref|XP_002318172.1| predicted protein [Populus trichocarpa] gi|222858845|gb|EEE96392.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/120 (43%), Positives = 82/120 (68%)
 Frame = +3

Query: 3   CGELGFARQLFDNMPMKKAVSCNALMAGFVLAEKFDDALSLFIEMKKLGIRADSMTMVGV 182
           CGE+GFAR++FD M  +  VS N++++G+       +A+ LF+EM++ G   D MT+V V
Sbjct: 176 CGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSV 235

Query: 183 LQSCASLGALQQGRWVHEQVIRSQMGINMYLGAALINMYARCGNLVKAQEIFDSLQEKNL 362
           L +C  LG L  GRWV   V+  +M +N Y+G+ALI+MY +CG+L+ A+ +FDS+  K++
Sbjct: 236 LGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDV 295



 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/119 (38%), Positives = 77/119 (64%)
 Frame = +3

Query: 3   CGELGFARQLFDNMPMKKAVSCNALMAGFVLAEKFDDALSLFIEMKKLGIRADSMTMVGV 182
           CG+L  AR++FD+MP K  V+ NA++ G+      ++A+ LF  M++ G   D +TM+ V
Sbjct: 277 CGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEV 336

Query: 183 LQSCASLGALQQGRWVHEQVIRSQMGINMYLGAALINMYARCGNLVKAQEIFDSLQEKN 359
           L +C+++GAL  G+WV        +  ++Y+ +ALI+MYA+CG+L  A  +F+S+  KN
Sbjct: 337 LSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKN 395



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/119 (26%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
 Frame = +3

Query: 9   ELGFARQLFDNMPMKKAVSCNALMAGFVLA-EKFDDALSLFIEMKKLGIRADSMTMVGVL 185
           +L +A  +F+ +      + N ++ G     +K+D  + L+ ++K LG++A++ T   + 
Sbjct: 76  DLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLF 135

Query: 186 QSCASLGALQQGRWVHEQVIRSQMGINMYLGAALINMYARCGNLVKAQEIFDSLQEKNL 362
            +C ++  L  G+  H  V ++ +  + Y+  +LI MYARCG +  A+++FD + +++L
Sbjct: 136 IACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDL 194



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
 Frame = +3

Query: 3   CGELGFARQLFDNMPMKKAVSCNALMAGFVLAEKFDDALSLFIEMKKLG--IRADSMTMV 176
           CG L  A ++F++MP K  VS NA+++      +  +ALSLF  M K    ++ + +T +
Sbjct: 378 CGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFI 437

Query: 177 GVLQSCASLGALQQGRWVHEQVIRSQMGI--NMYLGAALINMYARCGNLVKAQEIFDSLQ 350
           GVL +C   G + +GR + E +  S  G+   +   + ++++ AR G L +A ++   + 
Sbjct: 438 GVLSACVHAGLVDEGRQLFESMNLS-FGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMP 496

Query: 351 EK 356
            K
Sbjct: 497 GK 498