BLASTX nr result

ID: Atractylodes22_contig00040857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040857
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AET37154.1| GRAS family transcription factor, partial [Quercu...   130   1e-28
ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2...   125   5e-27
ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1...   125   5e-27
emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]   125   5e-27
ref|XP_002525276.1| Chitin-inducible gibberellin-responsive prot...   123   1e-26

>gb|AET37154.1| GRAS family transcription factor, partial [Quercus suber]
          Length = 477

 Score =  130 bits (326), Expect = 1e-28
 Identities = 58/74 (78%), Positives = 67/74 (90%)
 Frame = -3

Query: 225 IIDVSNTYCTQWPTLLEAIATRADETPHLRLTTAISSKSGGGHGIEKVMREIGNRMQKFA 46
           I+D SNTYCTQWPTLLEA+ATR DETPHLRLTT +++KSGG   ++KVM+EIGNRM+KFA
Sbjct: 218 IVDFSNTYCTQWPTLLEALATRTDETPHLRLTTVVATKSGGVAAVQKVMKEIGNRMEKFA 277

Query: 45  RLMGVPFKFNFIHH 4
           RLMGVPFKFN IHH
Sbjct: 278 RLMGVPFKFNVIHH 291


>ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2 [Vitis vinifera]
          Length = 509

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/77 (74%), Positives = 69/77 (89%), Gaps = 2/77 (2%)
 Frame = -3

Query: 225 IIDVSNTYCTQWPTLLEAIATRADETPHLRLTTAISSKSGGG--HGIEKVMREIGNRMQK 52
           IID+SNTYCTQWPTLLEA+ATR DETPHLRLTT ++SK+G G    ++K+M+EIGNRM+K
Sbjct: 242 IIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTSKAGTGGMAPVQKLMKEIGNRMEK 301

Query: 51  FARLMGVPFKFNFIHHT 1
           FARLMGVPFKFN +HH+
Sbjct: 302 FARLMGVPFKFNVLHHS 318


>ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1 [Vitis vinifera]
          Length = 494

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/77 (74%), Positives = 69/77 (89%), Gaps = 2/77 (2%)
 Frame = -3

Query: 225 IIDVSNTYCTQWPTLLEAIATRADETPHLRLTTAISSKSGGG--HGIEKVMREIGNRMQK 52
           IID+SNTYCTQWPTLLEA+ATR DETPHLRLTT ++SK+G G    ++K+M+EIGNRM+K
Sbjct: 227 IIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTSKAGTGGMAPVQKLMKEIGNRMEK 286

Query: 51  FARLMGVPFKFNFIHHT 1
           FARLMGVPFKFN +HH+
Sbjct: 287 FARLMGVPFKFNVLHHS 303


>emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]
          Length = 480

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/77 (74%), Positives = 69/77 (89%), Gaps = 2/77 (2%)
 Frame = -3

Query: 225 IIDVSNTYCTQWPTLLEAIATRADETPHLRLTTAISSKSGGG--HGIEKVMREIGNRMQK 52
           IID+SNTYCTQWPTLLEA+ATR DETPHLRLTT ++SK+G G    ++K+M+EIGNRM+K
Sbjct: 213 IIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTSKAGTGGMAPVQKLMKEIGNRMEK 272

Query: 51  FARLMGVPFKFNFIHHT 1
           FARLMGVPFKFN +HH+
Sbjct: 273 FARLMGVPFKFNVLHHS 289


>ref|XP_002525276.1| Chitin-inducible gibberellin-responsive protein, putative [Ricinus
           communis] gi|223535434|gb|EEF37104.1| Chitin-inducible
           gibberellin-responsive protein, putative [Ricinus
           communis]
          Length = 512

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/84 (70%), Positives = 68/84 (80%), Gaps = 10/84 (11%)
 Frame = -3

Query: 225 IIDVSNTYCTQWPTLLEAIATRADETPHLRLTTAISSKSGGGHG----------IEKVMR 76
           IID+SNTYCTQWPTLLEA+ATR DETPHLRLTT ++SK+ GG G           +KVM+
Sbjct: 237 IIDISNTYCTQWPTLLEALATRTDETPHLRLTTIVASKTNGGGGGGGGNCGLVSAQKVMK 296

Query: 75  EIGNRMQKFARLMGVPFKFNFIHH 4
           EIG+RM+KFARLMGVPFKFN IHH
Sbjct: 297 EIGSRMEKFARLMGVPFKFNVIHH 320


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