BLASTX nr result

ID: Atractylodes22_contig00040843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040843
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD14634.1| expansin precursor, partial [Solanum tuberosum]        295   9e-78
ref|XP_002270003.1| PREDICTED: expansin-A13-like [Vitis vinifera]     294   2e-77
ref|XP_002526588.1| Alpha-expansin 13 precursor, putative [Ricin...   294   3e-77
ref|NP_001234078.1| expansin A3 precursor [Solanum lycopersicum]...   294   3e-77
ref|XP_004148906.1| PREDICTED: expansin-A13-like [Cucumis sativu...   286   7e-75

>gb|ADD14634.1| expansin precursor, partial [Solanum tuberosum]
          Length = 209

 Score =  295 bits (756), Expect = 9e-78
 Identities = 138/170 (81%), Positives = 144/170 (84%)
 Frame = -2

Query: 1021 RCVEDLRWCIPGTSIIVTATNFCAPNYGFPADGGGKCNPPNAHFVLPIEIFGKIAIWKAS 842
            RCVEDLRWCIPGTSIIVTATNFCAPNYGF  DGGG CNPPNAHFVLPIE F KIAIWKAS
Sbjct: 40   RCVEDLRWCIPGTSIIVTATNFCAPNYGFDLDGGGHCNPPNAHFVLPIEAFEKIAIWKAS 99

Query: 841  NMPIQYRRIKCRKEGGIRFTINGAGIFLSVLXXXXXXXXXXXXXXXXGSRTGWLPMNRNW 662
            NMPIQYRRIKCRKEGG+RFT+ G+GIFLSVL                GSRTGWLPM RNW
Sbjct: 100  NMPIQYRRIKCRKEGGVRFTVGGSGIFLSVLISNVAGSGDIVAAKVKGSRTGWLPMGRNW 159

Query: 661  GQNWHINADLKNQPLSFEVTSSDGLTLTSYNVAPKDWNFGQSFEGKQFQS 512
            GQNWHINADLKNQPLSFE+TS DG TLTSYNVAPK+WNFGQ+FEGKQF S
Sbjct: 160  GQNWHINADLKNQPLSFEMTSGDGATLTSYNVAPKNWNFGQTFEGKQFGS 209


>ref|XP_002270003.1| PREDICTED: expansin-A13-like [Vitis vinifera]
          Length = 313

 Score =  294 bits (753), Expect = 2e-77
 Identities = 133/170 (78%), Positives = 147/170 (86%)
 Frame = -2

Query: 1021 RCVEDLRWCIPGTSIIVTATNFCAPNYGFPADGGGKCNPPNAHFVLPIEIFGKIAIWKAS 842
            RCV+DLRWCIPGTSIIVTATNFCAPNYGFPADGGG CNPPN HFVLPIE F KIAIWKA+
Sbjct: 144  RCVDDLRWCIPGTSIIVTATNFCAPNYGFPADGGGHCNPPNNHFVLPIEAFEKIAIWKAA 203

Query: 841  NMPIQYRRIKCRKEGGIRFTINGAGIFLSVLXXXXXXXXXXXXXXXXGSRTGWLPMNRNW 662
            NMP+ YRRIKCRKEGG+RF+++G+GIFLSVL                GSRTGWLPM RNW
Sbjct: 204  NMPVHYRRIKCRKEGGVRFSLDGSGIFLSVLISNVGGAGDIVGVKVKGSRTGWLPMGRNW 263

Query: 661  GQNWHINADLKNQPLSFEVTSSDGLTLTSYNVAPKDWNFGQSFEGKQFQS 512
            GQNWH+NADLKNQPLSFE+T+SDG+TLTSYNVAPK WNFGQ+FEGKQF+S
Sbjct: 264  GQNWHLNADLKNQPLSFEITASDGITLTSYNVAPKGWNFGQTFEGKQFES 313


>ref|XP_002526588.1| Alpha-expansin 13 precursor, putative [Ricinus communis]
            gi|223534082|gb|EEF35800.1| Alpha-expansin 13 precursor,
            putative [Ricinus communis]
          Length = 269

 Score =  294 bits (752), Expect = 3e-77
 Identities = 134/170 (78%), Positives = 145/170 (85%)
 Frame = -2

Query: 1021 RCVEDLRWCIPGTSIIVTATNFCAPNYGFPADGGGKCNPPNAHFVLPIEIFGKIAIWKAS 842
            RCVEDLRWCIPGTS+IVT TNFCAPNYGFP+DGGG CNPPN HFVLPIE + KIAIWKA 
Sbjct: 100  RCVEDLRWCIPGTSVIVTVTNFCAPNYGFPSDGGGHCNPPNLHFVLPIESYEKIAIWKAG 159

Query: 841  NMPIQYRRIKCRKEGGIRFTINGAGIFLSVLXXXXXXXXXXXXXXXXGSRTGWLPMNRNW 662
            NMP+QYRRIKCRKEGGIRFT++G+ IF+SVL                GSRTGWLPM RNW
Sbjct: 160  NMPVQYRRIKCRKEGGIRFTVSGSTIFISVLISNVAGAGDVVAVKIKGSRTGWLPMGRNW 219

Query: 661  GQNWHINADLKNQPLSFEVTSSDGLTLTSYNVAPKDWNFGQSFEGKQFQS 512
            GQNWHINADLKNQPLSFEVTSSDGLT+TSYNVAPKDWNFGQ+FEGKQF +
Sbjct: 220  GQNWHINADLKNQPLSFEVTSSDGLTVTSYNVAPKDWNFGQTFEGKQFMT 269


>ref|NP_001234078.1| expansin A3 precursor [Solanum lycopersicum]
            gi|4138912|gb|AAD13631.1| expansin precursor [Solanum
            lycopersicum]
          Length = 267

 Score =  294 bits (752), Expect = 3e-77
 Identities = 137/170 (80%), Positives = 146/170 (85%)
 Frame = -2

Query: 1021 RCVEDLRWCIPGTSIIVTATNFCAPNYGFPADGGGKCNPPNAHFVLPIEIFGKIAIWKAS 842
            RCVE+LRWCIPGTSIIVTATNFCAPNYGF  DGGG CNPPNAHFVLPIE F KIAIWKAS
Sbjct: 98   RCVEELRWCIPGTSIIVTATNFCAPNYGFEPDGGGHCNPPNAHFVLPIEAFEKIAIWKAS 157

Query: 841  NMPIQYRRIKCRKEGGIRFTINGAGIFLSVLXXXXXXXXXXXXXXXXGSRTGWLPMNRNW 662
            NMP+QYRRIKCRKEGG+RFTINGAGIFLSVL                GSRTGWLPM R W
Sbjct: 158  NMPVQYRRIKCRKEGGVRFTINGAGIFLSVLISNVAGAGDIVAAKVKGSRTGWLPMGRIW 217

Query: 661  GQNWHINADLKNQPLSFEVTSSDGLTLTSYNVAPKDWNFGQSFEGKQFQS 512
            GQNWHI+ADLKNQPLSFE+TSSDG+TLTSYNVAPK WNFGQ+F+GKQF+S
Sbjct: 218  GQNWHISADLKNQPLSFEITSSDGVTLTSYNVAPKIWNFGQTFQGKQFES 267


>ref|XP_004148906.1| PREDICTED: expansin-A13-like [Cucumis sativus]
            gi|449484934|ref|XP_004157021.1| PREDICTED:
            expansin-A13-like [Cucumis sativus]
          Length = 268

 Score =  286 bits (731), Expect = 7e-75
 Identities = 131/170 (77%), Positives = 143/170 (84%)
 Frame = -2

Query: 1021 RCVEDLRWCIPGTSIIVTATNFCAPNYGFPADGGGKCNPPNAHFVLPIEIFGKIAIWKAS 842
            RCVEDLRWCIPGTSIIVT TNFCAPNYGF A+GGG CNPPN HFVLPIE F KIAIWKA 
Sbjct: 99   RCVEDLRWCIPGTSIIVTVTNFCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAG 158

Query: 841  NMPIQYRRIKCRKEGGIRFTINGAGIFLSVLXXXXXXXXXXXXXXXXGSRTGWLPMNRNW 662
            NMP+QYRRIKCRKEGGIR+T++G GI+LSVL                G+RTGWLPM RNW
Sbjct: 159  NMPVQYRRIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNW 218

Query: 661  GQNWHINADLKNQPLSFEVTSSDGLTLTSYNVAPKDWNFGQSFEGKQFQS 512
            GQNWHINADL +Q LSFEVTSSDG+T+TSYNVAPKDWNFGQ+FEGKQF+S
Sbjct: 219  GQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 268


Top