BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040837
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063866.1| Os09g0551200 [Oryza sativa Japonica Group] g...    61   8e-08
gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subc...    57   1e-06
ref|NP_001150428.1| retrotransposon protein [Zea mays] gi|195639...    56   4e-06
ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group] g...    55   8e-06

>ref|NP_001063866.1| Os09g0551200 [Oryza sativa Japonica Group]
           gi|113632099|dbj|BAF25780.1| Os09g0551200 [Oryza sativa
           Japonica Group]
          Length = 280

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
 Frame = +3

Query: 189 MPKYLRLEDMSIV----TQTKEGGGVPFQCPMLTSSNYTAWAIRMEAIMDAQGLWE 344
           MPK LR   MSIV    +++   GGV    PMLTS+NY+ WAI+MEA M+AQG+W+
Sbjct: 1   MPKILRFNKMSIVEHSASRSMREGGVSLPYPMLTSTNYSTWAIKMEANMEAQGIWD 56


>gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 904

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
 Frame = +3

Query: 177 RAAFMPKYLRLEDMSIV----TQTKEGGGVPFQCPMLTSSNYTAWAIRMEAIMDAQGLWE 344
           ++ FMPK LR   M+IV    +++   G V    P+LTS+NY+ WAI+MEA M+AQG+W+
Sbjct: 410 QSQFMPKILRFNKMAIVEHSASRSMREGIVSLPYPVLTSTNYSTWAIKMEANMEAQGIWD 469


>ref|NP_001150428.1| retrotransposon protein [Zea mays] gi|195639184|gb|ACG39060.1|
           retrotransposon protein [Zea mays]
          Length = 274

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
 Frame = +3

Query: 189 MPK----YLRLEDMSIVTQTKEGGGVPFQCPMLTSSNYTAWAIRMEAIMDAQGLWE 344
           MPK    YL  E M++V     G  V    P+L+ ++YTAWAI++E+I+DAQGLWE
Sbjct: 1   MPKILRYYLESESMAMVPHGAGGSSVSMSYPVLSPASYTAWAIKVESILDAQGLWE 56


>ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group]
           gi|113534520|dbj|BAF06903.1| Os01g0879800 [Oryza sativa
           Japonica Group]
          Length = 278

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
 Frame = +3

Query: 189 MPKYLRLEDMSIV----TQTKEGGGVPFQCPMLTSSNYTAWAIRMEAIMDAQGLWE 344
           MPK LR   M+IV    +++   G V    P+LTS+NY+ WAI+MEA M+AQG+W+
Sbjct: 1   MPKILRFNKMAIVEHSASRSMREGIVSLPYPVLTSTNYSTWAIKMEANMEAQGIWD 56