BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040817
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,...    75   7e-12
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arab...    62   4e-08
ref|NP_196771.1| pentatricopeptide repeat-containing protein [Ar...    59   3e-07

>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/98 (46%), Positives = 68/98 (69%), Gaps = 5/98 (5%)
 Frame = -1

Query: 280 SIFTTPSDIYTRYK-----EKPKLFSSLVLSVCAEANLPNEAVDLYMLIRKDGVFPSLAS 116
           S F++PS +YT +       KP LFS ++LS+C+E+ + +E+ +LYML++KDGV PS+AS
Sbjct: 91  SPFSSPSHLYTLFSLSSTPMKP-LFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVAS 149

Query: 115 FNLLLECLVSSGQYGRVLDLFDHVLSSGTRVDKFTFGK 2
            NL LE LVS+ +Y   L LF  ++ SG R D+F +GK
Sbjct: 150 LNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGK 187


>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 817

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
 Frame = -1

Query: 280 SIFTTPSDIYTRYKEKPK----LFSSLVLSVCAEANLPNEAVDLYMLIRKDGVFPSLASF 113
           S F++PSD+++ +           S ++LSVC ++ +  EAV+LY  +R+DG  PSL S 
Sbjct: 85  STFSSPSDLFSCFSACSIPLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSL 144

Query: 112 NLLLECLVSSGQYGRVLDLFDHVLSSGTRVDKFTFGK 2
           +LL  CLV+  Q+ +V+DLF  + +SG R D F + K
Sbjct: 145 SLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAK 181


>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/91 (39%), Positives = 54/91 (59%)
 Frame = -1

Query: 274 FTTPSDIYTRYKEKPKLFSSLVLSVCAEANLPNEAVDLYMLIRKDGVFPSLASFNLLLEC 95
           F++ S+++  +  KP  FS  +L +C+ + + +EA DLY  +RKDG  PS  S N LL  
Sbjct: 74  FSSLSELHA-HVSKP-FFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRT 131

Query: 94  LVSSGQYGRVLDLFDHVLSSGTRVDKFTFGK 2
           LV S  + + L +F  V+ SGTR D   +GK
Sbjct: 132 LVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162


>ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata] gi|297317348|gb|EFH47770.1| hypothetical protein
           ARALYDRAFT_350399 [Arabidopsis lyrata subsp. lyrata]
          Length = 1202

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
 Frame = -1

Query: 274 FTTPSDIYTRYK-EKPKL---FSSLVLSVCA-EANLPNEAVDLYMLIRKDGVFPSLASFN 110
           FT+P ++++ +    P L   FS L+LSV   E+ + +EA DL+  +R +G+FPS  S  
Sbjct: 462 FTSPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLT 521

Query: 109 LLLECLVSSGQYGRVLDLFDHVLSSGTRVDKFTFGK 2
           LLL+ LV + Q+   +++F ++L S  R  KF +GK
Sbjct: 522 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557


>ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
           gi|9759377|dbj|BAB10028.1| unnamed protein product
           [Arabidopsis thaliana] gi|28973713|gb|AAO64173.1|
           unknown protein [Arabidopsis thaliana]
           gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis
           thaliana] gi|110737169|dbj|BAF00534.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332004380|gb|AED91763.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/96 (35%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
 Frame = -1

Query: 274 FTTPSDIYTRYK-EKPKL---FSSLVLSVCA-EANLPNEAVDLYMLIRKDGVFPSLASFN 110
           F +P ++++ +    P L   FS L+LSV   E+ + +EA DL+  +R +G++PS  S  
Sbjct: 89  FASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLT 148

Query: 109 LLLECLVSSGQYGRVLDLFDHVLSSGTRVDKFTFGK 2
           LLL+ LV + Q+   +++F ++L S  R  KF +GK
Sbjct: 149 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184