BLASTX nr result

ID: Atractylodes22_contig00040815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040815
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein ...   102   3e-20
ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [...   100   2e-19
ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein ...    96   3e-18
gb|EAY76934.1| hypothetical protein OsI_04892 [Oryza sativa Indi...    92   3e-17
ref|XP_002321147.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16

>ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|297739201|emb|CBI28852.3| unnamed protein
           product [Vitis vinifera]
          Length = 140

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/74 (70%), Positives = 59/74 (79%)
 Frame = -3

Query: 431 SEVRIMYDKDSGRSRGFGFVNFSREVEATSAKDAMDGKAFLGRPLRVSFALDKVHREPVT 252
           +EVRIMYDKDSGRSRGFGFV FS+EV+A SAKDAMDGKAFLGRPLRVS+AL+KV   P+ 
Sbjct: 65  TEVRIMYDKDSGRSRGFGFVYFSKEVDARSAKDAMDGKAFLGRPLRVSYALEKVRGGPIV 124

Query: 251 SRRNNSGTTFGRSR 210
             R  +G     SR
Sbjct: 125 VPRRLNGGDDNNSR 138


>ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 126

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/66 (75%), Positives = 55/66 (83%)
 Frame = -3

Query: 431 SEVRIMYDKDSGRSRGFGFVNFSREVEATSAKDAMDGKAFLGRPLRVSFALDKVHREPVT 252
           SEVRIMYDKDSGRSRGFGFVNFS+E EA  AKDAMDGKA LGRPLR+SFAL+KV   P+ 
Sbjct: 52  SEVRIMYDKDSGRSRGFGFVNFSKENEAVCAKDAMDGKALLGRPLRISFALEKVRGGPIV 111

Query: 251 SRRNNS 234
             R +S
Sbjct: 112 VPRLSS 117


>ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus] gi|449522522|ref|XP_004168275.1|
           PREDICTED: glycine-rich RNA-binding protein 2,
           mitochondrial-like [Cucumis sativus]
          Length = 145

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/73 (68%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
 Frame = -3

Query: 431 SEVRIMYDKDSGRSRGFGFVNFSREVEATSAKDAMDGKAFLGRPLRVSFALDKVHREP-V 255
           +EVRI+YDKDSGRSRGFGFVNF+   +A  AKDAMDGKA LGRPLR+SFALDKV  EP V
Sbjct: 71  TEVRIVYDKDSGRSRGFGFVNFANGNDAQCAKDAMDGKAVLGRPLRISFALDKVRGEPVV 130

Query: 254 TSRRNNSGTTFGR 216
             R +N     GR
Sbjct: 131 VPRLSNINNLVGR 143


>gb|EAY76934.1| hypothetical protein OsI_04892 [Oryza sativa Indica Group]
          Length = 505

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/61 (75%), Positives = 49/61 (80%)
 Frame = -3

Query: 425 VRIMYDKDSGRSRGFGFVNFSREVEATSAKDAMDGKAFLGRPLRVSFALDKVHREPVTSR 246
           VRIMYDK+SGRSRGFGFV+FS E EA  AKDAMDGK  LGRPLR+SFALDKV   PV   
Sbjct: 429 VRIMYDKNSGRSRGFGFVHFSNEYEAKCAKDAMDGKVMLGRPLRISFALDKVRGAPVVVP 488

Query: 245 R 243
           R
Sbjct: 489 R 489


>ref|XP_002321147.1| predicted protein [Populus trichocarpa] gi|222861920|gb|EEE99462.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/67 (64%), Positives = 54/67 (80%)
 Frame = -3

Query: 431 SEVRIMYDKDSGRSRGFGFVNFSREVEATSAKDAMDGKAFLGRPLRVSFALDKVHREPVT 252
           +EV I+YD++SGRSRGFGFV+F +E EA SAKDAMDGKA LGRPLR+S+AL++V   PV 
Sbjct: 45  TEVNILYDRNSGRSRGFGFVSFCKEDEAVSAKDAMDGKALLGRPLRISYALERVRGGPVV 104

Query: 251 SRRNNSG 231
             R  +G
Sbjct: 105 VPRLPNG 111


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