BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040796
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...   114   9e-24
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...   112   5e-23
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   111   8e-23
gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group...   110   1e-22
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]              110   1e-22

>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score =  114 bits (285), Expect = 9e-24
 Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
 Frame = -1

Query: 535 KDVYHVPHLKYNLMYVQQLCRDNDCTVCFDKSRVYVNDNHTREIRLQASNKGSVYPITXX 356
           K++   P L  NL+ ++Q  RDN+C++ FD+    V    TR + L+ +++G +Y +   
Sbjct: 415 KNILVAPSLVRNLLSIRQFTRDNNCSIEFDEFGFSVKGLRTRRVILRCNSRGDLYTLPIA 474

Query: 355 XXXXXXXXXXXXXXSTPGQVWYGRLGHCGDRILSTLQKNKVIVSSSDFDHK-CVSCRLGK 179
                              +W+ RLGH     + TL K   I+  +  DH  C +C+LGK
Sbjct: 475 APAIAAHSFLAQS----STLWHRRLGHPSSAAIQTLHK-LAILPCTKIDHSLCHACKLGK 529

Query: 178 SQRLPFIDVVHSCDKPLQLIHSDVWQSPILSNLGFKYYVCFIDDYSWYTWIYLLK*KSE 2
             RLPF     S   P +L+H DVW SP+LS  GFKYY+  +DD+S + W + L+ KS+
Sbjct: 530 HTRLPFSRSQSSTSSPFELVHCDVWTSPVLSTSGFKYYLVVLDDFSHFCWTFPLRHKSD 588


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score =  112 bits (279), Expect = 5e-23
 Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
 Frame = -1

Query: 532 DVYHVPHLKYNLMYVQQLCRDNDCTVCFDKSRVYVNDNHTREIRLQASNKGSVYPITXXX 353
           DV   P +  +L+ V +L +D  CTV FD   V +ND  T+++ +  S    +Y +    
Sbjct: 390 DVLVCPSITKSLLSVSKLTQDYPCTVEFDSDGVRINDKATKKLLIMGSTCDGLYCLKDDS 449

Query: 352 XXXXXXXXXXXXXSTPGQVWYGRLGHCGDRILSTLQKNKVIVSSSDFDHKCVSCRLGKSQ 173
                            +VW+ RLGH   ++L  L K   I  +      C +C+LGKS 
Sbjct: 450 QFKAFFSTRQQS--ASDEVWHRRLGHPHPQVLQQLVKTNSISINKTSKSLCEACQLGKST 507

Query: 172 RLPFIDVVHSCDKPLQLIHSDVW-QSPILSNLGFKYYVCFIDDYSWYTWIYLLK*KSE 2
           RLPF+    + ++PL+ +H D+W  SPI S  GF+YY  FID YS ++WIY LK KS+
Sbjct: 508 RLPFVSSSFTSNRPLERVHCDLWGPSPITSVQGFRYYAVFIDHYSRFSWIYPLKLKSD 565


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score =  111 bits (277), Expect = 8e-23
 Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 2/179 (1%)
 Frame = -1

Query: 532 DVYHVPHLKYNLMYVQQLCRDNDCTVCFDKSRVYVNDNHTREIRLQASNKGSVYPITXXX 353
           +V  VP+++ +L+ V +LC D  C V FD ++V + D  T+++      +  +Y +    
Sbjct: 380 EVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNGLYVLENQE 439

Query: 352 XXXXXXXXXXXXXSTPGQVWYGRLGHCGDRILSTLQKNKVI-VSSSDFDHKCVSCRLGKS 176
                            +VW+ RLGH   + L  LQ +K I ++ S     C  C++GKS
Sbjct: 440 FVALYSNRQCAATE---EVWHHRLGHANSKALQHLQNSKAIQINKSRTSPVCEPCQMGKS 496

Query: 175 QRLPFIDVVHSCDKPLQLIHSDVW-QSPILSNLGFKYYVCFIDDYSWYTWIYLLK*KSE 2
            RLPF+        PL  IH D+W  SP++SN G KYY  F+DDYS Y+W Y L  KSE
Sbjct: 497 SRLPFLISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNKSE 555


>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709048|gb|ABF96843.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 594

 Score =  110 bits (276), Expect = 1e-22
 Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 3/180 (1%)
 Frame = -1

Query: 532 DVYHV---PHLKYNLMYVQQLCRDNDCTVCFDKSRVYVNDNHTREIRLQASNKGSVYPIT 362
           D+ HV   P L  NL+ ++Q  RDN C++ FD+    + D  TR + L+ ++ G +Y + 
Sbjct: 405 DLRHVLVAPSLVRNLLSIRQFTRDNKCSIEFDEFGFSIKDPQTRRVILRCNSHGELYTLP 464

Query: 361 XXXXXXXXXXXXXXXXSTPGQVWYGRLGHCGDRILSTLQKNKVIVSSSDFDHKCVSCRLG 182
                            T   +W+ RLGH G   ++TLQ    I  S   +  C +C+LG
Sbjct: 465 AAAPSIAAHYNLA----TSSTLWHRRLGHPGPTAVTTLQHLSAIPRSKTNNSLCHACQLG 520

Query: 181 KSQRLPFIDVVHSCDKPLQLIHSDVWQSPILSNLGFKYYVCFIDDYSWYTWIYLLK*KSE 2
           K  RLPF     S   P +L+H DVW S ++S  GFK+Y+  +DD++ + W + L  KS+
Sbjct: 521 KHTRLPFNKSTSSTSSPFELVHCDVWTSLVMSISGFKFYLVLVDDFTHFCWTFPLCQKSD 580


>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score =  110 bits (276), Expect = 1e-22
 Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
 Frame = -1

Query: 517  PHLKYNLMYVQQLCRDNDCTVCFDKSRVYVNDNHTREIRLQASNKGSVYPITXXXXXXXX 338
            PH+  NL+ +++   DN+C + FD   + V D  TR +  + ++ G +YP          
Sbjct: 527  PHIIKNLISIRRFTTDNNCFIEFDPFGLSVKDLQTRNVIARCNSSGDLYPF------FPP 580

Query: 337  XXXXXXXXSTPGQVWYGRLGHCGDRILSTLQKNKVIVSSSDFD-HKCVSCRLGKSQRLPF 161
                    + P  +W+ RLGH G   LS L  +  I  + D D H C +C+LG+  RLPF
Sbjct: 581  ATSATALLAAPASLWHRRLGHLGREALSQLVSSSAISCNKDDDYHLCHACQLGRHTRLPF 640

Query: 160  IDVVHSCDKPLQLIHSDVWQSPILSNLGFKYYVCFIDDYSWYTWIYLLK*KSE 2
                        LIH D+W SPI+S  G+KYY+  +DD S Y W + L+ KS+
Sbjct: 641  STSTSRATNNFDLIHCDLWASPIVSVSGYKYYLIILDDRSHYIWTFPLRLKSD 693