BLASTX nr result

ID: Atractylodes22_contig00040792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040792
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512371.1| Protein YIPF1, putative [Ricinus communis] g...   181   5e-44
ref|XP_002284771.2| PREDICTED: protein YIPF1 homolog [Vitis vini...   175   4e-42
emb|CBI36763.3| unnamed protein product [Vitis vinifera]              175   4e-42
ref|XP_002328560.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|NP_198101.2| Yip1 integral membrane domain-containing protei...   161   6e-38

>ref|XP_002512371.1| Protein YIPF1, putative [Ricinus communis]
           gi|223548332|gb|EEF49823.1| Protein YIPF1, putative
           [Ricinus communis]
          Length = 279

 Score =  181 bits (459), Expect = 5e-44
 Identities = 90/120 (75%), Positives = 101/120 (84%), Gaps = 1/120 (0%)
 Frame = -2

Query: 357 IMSGNYTTIDNQNVSGSVPAVADVPGQVSFKFSDSTLQSFSPGS-QGKISGGSGPPRDAD 181
           +MSGNYT++DNQ VSGSVPAV D PG VS KFSDSTLQ+F P + QGKISGGS PPRDAD
Sbjct: 1   MMSGNYTSLDNQKVSGSVPAVPD-PGHVSVKFSDSTLQTFPPSTAQGKISGGSHPPRDAD 59

Query: 180 DAFSKPVSGSSEQPSDGWFKAFTIAAYQPYVDVDTSDVLERIKDSLFPFGGSFSEKTANN 1
           D FSKPVSGS E    GWF+ FTIAAY+PY D+DT+DVLERIKDSLFPF G+F+EKTA N
Sbjct: 60  DTFSKPVSGSDEPQQGGWFRTFTIAAYKPYFDIDTTDVLERIKDSLFPFRGTFTEKTAGN 119


>ref|XP_002284771.2| PREDICTED: protein YIPF1 homolog [Vitis vinifera]
          Length = 250

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/117 (72%), Positives = 98/117 (83%), Gaps = 1/117 (0%)
 Frame = -2

Query: 348 GNYTTIDNQNVSGSVPAVADVPGQVSFKFSDSTLQSFSPG-SQGKISGGSGPPRDADDAF 172
           GNYTTIDNQ +SGSVPAV+D PGQV+ KF+DS L++F P  +QGKISG S PPRDAD+ F
Sbjct: 5   GNYTTIDNQKISGSVPAVSD-PGQVTVKFADSNLETFPPSEAQGKISGASRPPRDADETF 63

Query: 171 SKPVSGSSEQPSDGWFKAFTIAAYQPYVDVDTSDVLERIKDSLFPFGGSFSEKTANN 1
           SKPV GS E P  GW ++FT+AAY+PY DVDTSDVLERIKDSLFPF GSFSEK A+N
Sbjct: 64  SKPVPGSDESPPSGWLRSFTVAAYKPYFDVDTSDVLERIKDSLFPFNGSFSEKVASN 120


>emb|CBI36763.3| unnamed protein product [Vitis vinifera]
          Length = 280

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/117 (72%), Positives = 98/117 (83%), Gaps = 1/117 (0%)
 Frame = -2

Query: 348 GNYTTIDNQNVSGSVPAVADVPGQVSFKFSDSTLQSFSPG-SQGKISGGSGPPRDADDAF 172
           GNYTTIDNQ +SGSVPAV+D PGQV+ KF+DS L++F P  +QGKISG S PPRDAD+ F
Sbjct: 5   GNYTTIDNQKISGSVPAVSD-PGQVTVKFADSNLETFPPSEAQGKISGASRPPRDADETF 63

Query: 171 SKPVSGSSEQPSDGWFKAFTIAAYQPYVDVDTSDVLERIKDSLFPFGGSFSEKTANN 1
           SKPV GS E P  GW ++FT+AAY+PY DVDTSDVLERIKDSLFPF GSFSEK A+N
Sbjct: 64  SKPVPGSDESPPSGWLRSFTVAAYKPYFDVDTSDVLERIKDSLFPFNGSFSEKVASN 120


>ref|XP_002328560.1| predicted protein [Populus trichocarpa] gi|222838275|gb|EEE76640.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  164 bits (414), Expect = 9e-39
 Identities = 86/119 (72%), Positives = 97/119 (81%), Gaps = 3/119 (2%)
 Frame = -2

Query: 348 GNYTTIDNQ-NVSGSVPAVADVPGQVSFKFS-DSTLQSFSP-GSQGKISGGSGPPRDADD 178
           G YT IDNQ  VSGSVPAV D PG V+ +F+ DS LQ+F P GSQGKISGGS PPRDADD
Sbjct: 7   GKYTHIDNQPQVSGSVPAVPD-PGHVTVQFTADSNLQTFPPSGSQGKISGGSRPPRDADD 65

Query: 177 AFSKPVSGSSEQPSDGWFKAFTIAAYQPYVDVDTSDVLERIKDSLFPFGGSFSEKTANN 1
            FSKP+SGS E    GWF+ FTIAAY+PY DVDT++VLERIKDSLFPF G+F+EKTANN
Sbjct: 66  TFSKPISGSDEPQQGGWFRTFTIAAYKPYFDVDTTEVLERIKDSLFPFRGTFTEKTANN 124


>ref|NP_198101.2| Yip1 integral membrane domain-containing protein [Arabidopsis
           thaliana] gi|332006310|gb|AED93693.1| Yip1 integral
           membrane domain-containing protein [Arabidopsis
           thaliana]
          Length = 282

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/118 (66%), Positives = 98/118 (83%), Gaps = 2/118 (1%)
 Frame = -2

Query: 348 GNYTTIDNQNVSGSVPAVADVPGQVSFKFSDSTLQSFSPGS-QGKISGGSGPPRDADDAF 172
           G+YT ID+Q VSGSVPAV D PG V+ KF+DS LQ+F P + QGKISGG+ PPRDADD F
Sbjct: 6   GSYTNIDHQKVSGSVPAVPD-PGHVTVKFADSNLQTFPPSATQGKISGGTNPPRDADDTF 64

Query: 171 SKPVSGSSEQP-SDGWFKAFTIAAYQPYVDVDTSDVLERIKDSLFPFGGSFSEKTANN 1
           S+PV+G++++P S GW   FT+ AY+PY DVDTSDV+ER+K+SLFPF G+F+EKTANN
Sbjct: 65  SRPVNGTTDEPQSSGWLHRFTVGAYKPYFDVDTSDVVERLKESLFPFRGTFTEKTANN 122


Top