BLASTX nr result

ID: Atractylodes22_contig00040774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040774
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37235.3| unnamed protein product [Vitis vinifera]              161   9e-42
gb|ABK93560.1| unknown [Populus trichocarpa]                          141   9e-35
ref|XP_002301831.1| predicted protein [Populus trichocarpa] gi|1...   141   9e-35
ref|NP_001190864.1| Tetraspanin family protein [Arabidopsis thal...   140   2e-33
ref|NP_194606.1| Tetraspanin family protein [Arabidopsis thalian...   140   2e-33

>emb|CBI37235.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  161 bits (408), Expect(2) = 9e-42
 Identities = 84/185 (45%), Positives = 110/185 (59%), Gaps = 9/185 (4%)
 Frame = -3

Query: 964 LLNFLIFLQTLIGISIIVYCPYVLNQWGKQFPNXXXXXXXXXXXXXXXXXPDYSVIVFNI 785
           LL  L FLQT IGISII Y  ++LNQW  Q P                   D + +    
Sbjct: 12  LLKVLNFLQTFIGISIIFYSLWMLNQWNHQIPVPSPPAPSPDSSQFPFLMSDTARV---- 67

Query: 784 NTGKEKEVIQFDYGAGTVTGIHDSN------PFPTPWFIYAFMCLGAVLCCTSCMDHIAA 623
               E ++  F + A  V+G  D+         P PWFIY+FM +G V+CC +C+ HIAA
Sbjct: 68  ---PEDKINPFAFAADMVSGSDDNGLVLQFIKLPAPWFIYSFMGVGIVVCCITCIGHIAA 124

Query: 622 EAINGCCLGFYTILKAMLILLEVGLVAFIAHDQPWEKDI---PSGEMDSVREFIQDNVDL 452
           EAINGCCL FYT+L  +LILLE GL+AF+A D  WEKD+   P+GE+++ R FI+ N+D+
Sbjct: 125 EAINGCCLCFYTMLTVLLILLEAGLIAFVAFDHHWEKDLPFDPTGELENFRSFIEGNIDI 184

Query: 451 CKWVG 437
           CKWVG
Sbjct: 185 CKWVG 189



 Score = 36.2 bits (82), Expect(2) = 9e-42
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
 Frame = -1

Query: 360 LCKWVGIVGIVIQAVCLL--AILLGTMQTKDVFICVHMEEGSAG-SRGPLLNPHSRE 199
           +CKWVGI  + IQA+ LL   IL   + T+     +  +  +AG +R PLLNP + +
Sbjct: 184 ICKWVGITVVSIQALSLLLAMILRAMVSTRKTDYDIEDDYTAAGRNREPLLNPQASQ 240


>gb|ABK93560.1| unknown [Populus trichocarpa]
          Length = 281

 Score =  141 bits (356), Expect(2) = 9e-35
 Identities = 81/186 (43%), Positives = 110/186 (59%), Gaps = 10/186 (5%)
 Frame = -3

Query: 964 LLNFLIFLQTLIGISIIVYCPYVLNQWGKQFPNXXXXXXXXXXXXXXXXXPDYSVIVFNI 785
           +L  L FLQ  IGISII+Y  ++L+QW  + P                    +S     +
Sbjct: 13  VLKLLNFLQAFIGISIIIYSFWMLDQWNNKVP--------VFPPSAPSPDSSFSSSSLLL 64

Query: 784 NTGKE----KEVIQFDYGAGTVTGIH-DSNPF--PTPWFIYAFMCLGAVLCCTSCMDHIA 626
             G E    ++++  D       G+  D N F  P PWFIY+FM +G +LCC + +  IA
Sbjct: 65  LPGSESHSIRDLVFSDVVPRFENGLDFDLNSFQLPAPWFIYSFMGVGVILCCITFIGCIA 124

Query: 625 AEAINGCCLGFYTILKAMLILLEVGLVAFIAHDQPWEKDI---PSGEMDSVREFIQDNVD 455
           AE+INGCCL FYTILK + ILLE  LVAFIA D+ WEKD+   P+GE+ S+R F+++NVD
Sbjct: 125 AESINGCCLCFYTILKIVFILLEAALVAFIAIDRRWEKDLPFDPTGELQSLRIFVEENVD 184

Query: 454 LCKWVG 437
           +CKWVG
Sbjct: 185 ICKWVG 190



 Score = 32.7 bits (73), Expect(2) = 9e-35
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = -1

Query: 360 LCKWVGIVGIVIQAVC-LLAILLGTMQT--KDVFICVHMEEGSAGSRGPLLN 214
           +CKWVGI  ++IQA+  LLA++L  M +  ++ F     E     +R PLLN
Sbjct: 185 ICKWVGITVLIIQALALLLAMILRAMVSTRRNEFDEDDFENVRGRTREPLLN 236


>ref|XP_002301831.1| predicted protein [Populus trichocarpa] gi|118482993|gb|ABK93408.1|
           unknown [Populus trichocarpa]
           gi|222843557|gb|EEE81104.1| predicted protein [Populus
           trichocarpa]
          Length = 281

 Score =  141 bits (356), Expect(2) = 9e-35
 Identities = 81/186 (43%), Positives = 110/186 (59%), Gaps = 10/186 (5%)
 Frame = -3

Query: 964 LLNFLIFLQTLIGISIIVYCPYVLNQWGKQFPNXXXXXXXXXXXXXXXXXPDYSVIVFNI 785
           +L  L FLQ  IGISII+Y  ++L+QW  + P                    +S     +
Sbjct: 13  VLKLLNFLQAFIGISIIIYSFWMLDQWNNKVP--------VFPPSAPSPDSSFSSSSLLL 64

Query: 784 NTGKE----KEVIQFDYGAGTVTGIH-DSNPF--PTPWFIYAFMCLGAVLCCTSCMDHIA 626
             G E    ++++  D       G+  D N F  P PWFIY+FM +G +LCC + +  IA
Sbjct: 65  LPGSESHSIRDLVFSDVVPRFENGLDFDLNSFQLPAPWFIYSFMGVGVILCCITFIGCIA 124

Query: 625 AEAINGCCLGFYTILKAMLILLEVGLVAFIAHDQPWEKDI---PSGEMDSVREFIQDNVD 455
           AE+INGCCL FYTILK + ILLE  LVAFIA D+ WEKD+   P+GE+ S+R F+++NVD
Sbjct: 125 AESINGCCLCFYTILKIVFILLEAALVAFIAIDRRWEKDLPFDPTGELQSLRIFVEENVD 184

Query: 454 LCKWVG 437
           +CKWVG
Sbjct: 185 ICKWVG 190



 Score = 32.7 bits (73), Expect(2) = 9e-35
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = -1

Query: 360 LCKWVGIVGIVIQAVC-LLAILLGTMQT--KDVFICVHMEEGSAGSRGPLLN 214
           +CKWVGI  ++IQA+  LLA++L  M +  ++ F     E     +R PLLN
Sbjct: 185 ICKWVGITVLIIQALALLLAMILRAMVSTRRNEFDEDDFENVRGRTREPLLN 236


>ref|NP_001190864.1| Tetraspanin family protein [Arabidopsis thaliana]
           gi|332660141|gb|AEE85541.1| Tetraspanin family protein
           [Arabidopsis thaliana]
          Length = 325

 Score =  140 bits (353), Expect(2) = 2e-33
 Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 10/187 (5%)
 Frame = -3

Query: 967 TLLNFLIFLQTLIGISIIVYCPYVLNQWGKQFP-NXXXXXXXXXXXXXXXXXPDYSVIVF 791
           ++L  L FLQ  IGISII+Y  ++L+Q+    P +                    S+I  
Sbjct: 56  SILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDSSYSFSNSIIEI 115

Query: 790 NINTGKEKEVIQFDYGAGTVTGIHDSN------PFPTPWFIYAFMCLGAVLCCTSCMDHI 629
           N  +   K  I F  G    +G  DS         P PWFIY FM +G ++C  + +  I
Sbjct: 116 NSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCIVTIIGFI 175

Query: 628 AAEAINGCCLGFYTILKAMLILLEVGLVAFIAHDQPWEKDI---PSGEMDSVREFIQDNV 458
           AAEAINGCCL FY+ILK +LI++E  LV FI  D+ WEKD+   P+GE++S+R FI++N+
Sbjct: 176 AAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIEENI 235

Query: 457 DLCKWVG 437
           D+CKWVG
Sbjct: 236 DICKWVG 242



 Score = 29.3 bits (64), Expect(2) = 2e-33
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -1

Query: 360 LCKWVGIVGIVIQAVCLLAILL 295
           +CKWVGIV + IQ + LL  L+
Sbjct: 237 ICKWVGIVVVAIQLLSLLLALV 258


>ref|NP_194606.1| Tetraspanin family protein [Arabidopsis thaliana]
           gi|75266419|sp|Q9SVU4.1|TET20_ARATH RecName:
           Full=Tetraspanin-20 gi|4218121|emb|CAA22975.1| putative
           protein [Arabidopsis thaliana]
           gi|7269732|emb|CAB81465.1| putative protein [Arabidopsis
           thaliana] gi|21554050|gb|AAM63131.1| unknown
           [Arabidopsis thaliana] gi|29029076|gb|AAO64917.1|
           At4g28770 [Arabidopsis thaliana]
           gi|110743049|dbj|BAE99417.1| hypothetical protein
           [Arabidopsis thaliana] gi|332660140|gb|AEE85540.1|
           Tetraspanin family protein [Arabidopsis thaliana]
          Length = 281

 Score =  140 bits (353), Expect(2) = 2e-33
 Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 10/187 (5%)
 Frame = -3

Query: 967 TLLNFLIFLQTLIGISIIVYCPYVLNQWGKQFP-NXXXXXXXXXXXXXXXXXPDYSVIVF 791
           ++L  L FLQ  IGISII+Y  ++L+Q+    P +                    S+I  
Sbjct: 12  SILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDSSYSFSNSIIEI 71

Query: 790 NINTGKEKEVIQFDYGAGTVTGIHDSN------PFPTPWFIYAFMCLGAVLCCTSCMDHI 629
           N  +   K  I F  G    +G  DS         P PWFIY FM +G ++C  + +  I
Sbjct: 72  NSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCIVTIIGFI 131

Query: 628 AAEAINGCCLGFYTILKAMLILLEVGLVAFIAHDQPWEKDI---PSGEMDSVREFIQDNV 458
           AAEAINGCCL FY+ILK +LI++E  LV FI  D+ WEKD+   P+GE++S+R FI++N+
Sbjct: 132 AAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIEENI 191

Query: 457 DLCKWVG 437
           D+CKWVG
Sbjct: 192 DICKWVG 198



 Score = 29.3 bits (64), Expect(2) = 2e-33
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -1

Query: 360 LCKWVGIVGIVIQAVCLLAILL 295
           +CKWVGIV + IQ + LL  L+
Sbjct: 193 ICKWVGIVVVAIQLLSLLLALV 214


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