BLASTX nr result

ID: Atractylodes22_contig00040771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040771
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303399.1| predicted protein [Populus trichocarpa] gi|1...   197   1e-48
emb|CBI33697.3| unnamed protein product [Vitis vinifera]              197   2e-48
gb|AEV41136.1| D5-type cyclin [Populus x canadensis]                  195   6e-48
ref|XP_002510103.1| cyclin d, putative [Ricinus communis] gi|223...   191   2e-46
ref|XP_003523620.1| PREDICTED: cyclin-D5-1-like [Glycine max]         186   3e-45

>ref|XP_002303399.1| predicted protein [Populus trichocarpa]
           gi|159025723|emb|CAN88862.1| D5-type cyclin [Populus
           trichocarpa] gi|222840831|gb|EEE78378.1| predicted
           protein [Populus trichocarpa]
          Length = 337

 Score =  197 bits (502), Expect = 1e-48
 Identities = 106/226 (46%), Positives = 143/226 (63%), Gaps = 15/226 (6%)
 Frame = +1

Query: 55  DSNTTFSLPNLLCQEDES-----------SLNEVKVKVSVPRSEDDQFIRSLIERESKSK 201
           D + + SL +LLC E+ES           ++   + +  +    D +++  L+ERE+ + 
Sbjct: 3   DFDNSLSLSSLLCHENESCFFNDSISDHSNIKHDRSRFGLETEVDVEYVEKLVERETITF 62

Query: 202 DHECVCDDEH----GRKWLKCARLDAVDWIFSTREILGFHFRTAYLSLTYFDRFSSRRPI 369
            + C    +        WLK ARLDA++WI +TR I GF F TAYLS+TYFDRF S+R I
Sbjct: 63  GYRCHASFDDCLITSHNWLKFARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSI 122

Query: 370 DNGKEWAIQLLCIACLSLAAKMEEQIVPSLSHYKAQGYNFESSVIQRMELMVLTTLEWKM 549
           D GK WAI+LL +ACLSLAAKMEE+ VP LS +  + Y F + VIQRMEL+VL TLEW+M
Sbjct: 123 DEGKLWAIRLLSVACLSLAAKMEERKVPPLSEFPVEDYCFGNKVIQRMELLVLNTLEWRM 182

Query: 550 CCITPFAYLHHFLSKICDECDCNEFLVSKAIGLILDFSKAANLMDH 687
             ITPFAYLH+F+ K C E    E  VS+A+ LI+   K  +L+DH
Sbjct: 183 NSITPFAYLHYFIHKTCGESTPKE-TVSRAVELIVAMIKEIDLLDH 227


>emb|CBI33697.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  197 bits (501), Expect = 2e-48
 Identities = 104/219 (47%), Positives = 146/219 (66%), Gaps = 9/219 (4%)
 Frame = +1

Query: 58  SNTTFSLPNLLCQEDESSLNE------VKVKVSVPRSEDDQFIRSLIERESKS---KDHE 210
           S T++SLP+LLCQE+E+   E      + +   +    +D++I+SL++RE+KS    D+ 
Sbjct: 7   SETSYSLPSLLCQENEACFGEEEQDQYMNLDPCLFSQSEDEYIQSLVKRETKSTMSSDNR 66

Query: 211 CVCDDEHGRKWLKCARLDAVDWIFSTREILGFHFRTAYLSLTYFDRFSSRRPIDNGKEWA 390
            + +    + WLK ARLD++ W+ +TR   GF +RTAYL + YFD F SRR IDN + WA
Sbjct: 67  SITN----QSWLKRARLDSIKWVLNTRAFFGFQYRTAYLCVAYFDLFLSRRSIDNERFWA 122

Query: 391 IQLLCIACLSLAAKMEEQIVPSLSHYKAQGYNFESSVIQRMELMVLTTLEWKMCCITPFA 570
             LL +ACLSLAAKMEE  VP+LS +  +GY F++ VI+RMELMVL TLEWKM  ITPF 
Sbjct: 123 TGLLSVACLSLAAKMEELRVPNLSEFPVEGYYFDNKVIRRMELMVLETLEWKMLSITPFD 182

Query: 571 YLHHFLSKICDECDCNEFLVSKAIGLILDFSKAANLMDH 687
           ++  F++K C E    E LVS+ + L+L  ++  NLMDH
Sbjct: 183 FIPCFINKFCGESKSKE-LVSRTMELLLAITREVNLMDH 220


>gb|AEV41136.1| D5-type cyclin [Populus x canadensis]
          Length = 337

 Score =  195 bits (496), Expect = 6e-48
 Identities = 105/226 (46%), Positives = 142/226 (62%), Gaps = 15/226 (6%)
 Frame = +1

Query: 55  DSNTTFSLPNLLCQEDES-----------SLNEVKVKVSVPRSEDDQFIRSLIERESKSK 201
           D + + SL +LLC E+ES           ++   + +  +    D +++  L+ERE+ + 
Sbjct: 3   DFDNSLSLSSLLCYENESCFFNDSISDHSNIKHDQSRFGLETEVDVEYVEKLVERETITF 62

Query: 202 DHECVCDDEH----GRKWLKCARLDAVDWIFSTREILGFHFRTAYLSLTYFDRFSSRRPI 369
            + C    +        WLK ARLDA++WI +TR I GF F TAYLS+TYFDRF S+R I
Sbjct: 63  GYRCHASFDDCLITSHNWLKFARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSI 122

Query: 370 DNGKEWAIQLLCIACLSLAAKMEEQIVPSLSHYKAQGYNFESSVIQRMELMVLTTLEWKM 549
           D GK WAI+LL +ACLSLAAKMEE+ VP LS +  + Y F + VIQRME +VL TLEW+M
Sbjct: 123 DEGKLWAIRLLSVACLSLAAKMEERKVPPLSEFPVEDYCFGNKVIQRMEFLVLNTLEWRM 182

Query: 550 CCITPFAYLHHFLSKICDECDCNEFLVSKAIGLILDFSKAANLMDH 687
             ITPFAYLH+F+ K C E    E  VS+A+ LI+   K  +L+DH
Sbjct: 183 NSITPFAYLHYFIHKTCGESTPKE-TVSRAVELIVAMIKEIDLLDH 227


>ref|XP_002510103.1| cyclin d, putative [Ricinus communis] gi|223550804|gb|EEF52290.1|
           cyclin d, putative [Ricinus communis]
          Length = 327

 Score =  191 bits (484), Expect = 2e-46
 Identities = 102/215 (47%), Positives = 139/215 (64%), Gaps = 10/215 (4%)
 Frame = +1

Query: 73  SLPNLLCQEDESSLNEVKVKVSVP-------RSEDDQFIRSLIERE---SKSKDHECVCD 222
           S+  LLCQE E+ L E ++               +++++  L+E+E   SKSK+ + +  
Sbjct: 5   SISELLCQESETRLEEQELGDDEAIRNGFGDLDREEEYVEMLVEKEISFSKSKEDQSLST 64

Query: 223 DEHGRKWLKCARLDAVDWIFSTREILGFHFRTAYLSLTYFDRFSSRRPIDNGKEWAIQLL 402
            ++   W+K ARL+A+ WI   R I GF F+TAYLS+TYFDRF SRR ID  K WA++LL
Sbjct: 65  FDN---WVKFARLEAITWILKNRAIFGFGFQTAYLSITYFDRFLSRRSIDREKSWAVKLL 121

Query: 403 CIACLSLAAKMEEQIVPSLSHYKAQGYNFESSVIQRMELMVLTTLEWKMCCITPFAYLHH 582
            +ACLSLAAKMEE  VP LS+++ + YNFES VIQRMEL+VL TLEW+M   TPFA+LH+
Sbjct: 122 SVACLSLAAKMEEIKVPPLSNFQIEEYNFESKVIQRMELLVLNTLEWRMISSTPFAFLHY 181

Query: 583 FLSKICDECDCNEFLVSKAIGLILDFSKAANLMDH 687
           F+ K   E   +  LVS+ +GLI    K    M+H
Sbjct: 182 FIIKFSKEPPPSRHLVSRTVGLIFAVVKEITSMEH 216


>ref|XP_003523620.1| PREDICTED: cyclin-D5-1-like [Glycine max]
          Length = 312

 Score =  186 bits (473), Expect = 3e-45
 Identities = 107/213 (50%), Positives = 137/213 (64%), Gaps = 11/213 (5%)
 Frame = +1

Query: 82  NLLCQEDESSLNE--VKVKVSVPRSE------DDQFIRSLIERE---SKSKDHECVCDDE 228
           +LLCQE+E+ L E   +++     S+      +D+ +  LIERE      KD   V  D 
Sbjct: 7   SLLCQENETCLEEGGEELEYQFVGSQHDCGVSEDEHVGILIEREIVLGFKKDETMVIGD- 65

Query: 229 HGRKWLKCARLDAVDWIFSTREILGFHFRTAYLSLTYFDRFSSRRPIDNGKEWAIQLLCI 408
               W+K AR++A++W+  TR  LGF F TAYLS+TYFDRF  RR ID+ K WAI+LL I
Sbjct: 66  ----WVKRARMEAINWVLKTRATLGFRFETAYLSVTYFDRFLFRRSIDSEKSWAIRLLSI 121

Query: 409 ACLSLAAKMEEQIVPSLSHYKAQGYNFESSVIQRMELMVLTTLEWKMCCITPFAYLHHFL 588
           ACLSLAAKMEE IVP LS +K   Y+FE  VIQ+MEL+VL+TLEWKM  ITPF +L +F+
Sbjct: 122 ACLSLAAKMEECIVPGLSEFKLDDYSFEGKVIQKMELLVLSTLEWKMGIITPFDFLSYFI 181

Query: 589 SKICDECDCNEFLVSKAIGLILDFSKAANLMDH 687
            KIC E   +  + SK + LI    K  NLMDH
Sbjct: 182 RKICKESPPSP-IFSKTMQLIFTTMKEVNLMDH 213


Top