BLASTX nr result

ID: Atractylodes22_contig00040741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040741
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
emb|CBI27690.3| unnamed protein product [Vitis vinifera]               83   4e-14
ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-...    83   4e-14
emb|CAN72250.1| hypothetical protein VITISV_016331 [Vitis vinifera]    83   4e-14
ref|XP_003630425.1| E3 ubiquitin-protein ligase CHFR [Medicago t...    75   1e-11

>ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|222871849|gb|EEF08980.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 41/64 (64%), Positives = 53/64 (82%)
 Frame = +3

Query: 3   PHCRSVVQFVGRNHFLHSIQEEILQSDGSLRRSNEELAVLNSYALIKSPLFIDNGKKPGH 182
           P CR+VVQFVGRNHFLHSI+E++LQ+D SL++S+EE+ +L+SYA IKS L I  GKK  H
Sbjct: 177 PQCRAVVQFVGRNHFLHSIEEDVLQADSSLKQSDEEIILLDSYASIKSNLIIQTGKK--H 234

Query: 183 KRSR 194
           +R R
Sbjct: 235 RRKR 238


>emb|CBI27690.3| unnamed protein product [Vitis vinifera]
          Length = 1150

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 40/72 (55%), Positives = 55/72 (76%)
 Frame = +3

Query: 3    PHCRSVVQFVGRNHFLHSIQEEILQSDGSLRRSNEELAVLNSYALIKSPLFIDNGKKPGH 182
            P CR++VQFVGRNHFL +I+E ILQ+D SLRRS+EE+AVL S+A I+S L +  G K G 
Sbjct: 864  PQCRAIVQFVGRNHFLRTIEETILQADPSLRRSDEEVAVLESHASIQSNLVLKTGTKLGR 923

Query: 183  KRSRVAMADAAE 218
            KR+  ++ + +E
Sbjct: 924  KRAHSSLNEESE 935


>ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like [Vitis vinifera]
          Length = 462

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 40/72 (55%), Positives = 55/72 (76%)
 Frame = +3

Query: 3   PHCRSVVQFVGRNHFLHSIQEEILQSDGSLRRSNEELAVLNSYALIKSPLFIDNGKKPGH 182
           P CR++VQFVGRNHFL +I+E ILQ+D SLRRS+EE+AVL S+A I+S L +  G K G 
Sbjct: 176 PQCRAIVQFVGRNHFLRTIEETILQADPSLRRSDEEVAVLESHASIQSNLVLKTGTKLGR 235

Query: 183 KRSRVAMADAAE 218
           KR+  ++ + +E
Sbjct: 236 KRAHSSLNEESE 247


>emb|CAN72250.1| hypothetical protein VITISV_016331 [Vitis vinifera]
          Length = 436

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 40/72 (55%), Positives = 55/72 (76%)
 Frame = +3

Query: 3   PHCRSVVQFVGRNHFLHSIQEEILQSDGSLRRSNEELAVLNSYALIKSPLFIDNGKKPGH 182
           P CR++VQFVGRNHFL +I+E ILQ+D SLRRS+EE+AVL S+A I+S L +  G K G 
Sbjct: 163 PQCRAIVQFVGRNHFLRTIEETILQADPSLRRSDEEVAVLESHASIQSNLVLKTGTKLGR 222

Query: 183 KRSRVAMADAAE 218
           KR+  ++ + +E
Sbjct: 223 KRAHSSLNEESE 234


>ref|XP_003630425.1| E3 ubiquitin-protein ligase CHFR [Medicago truncatula]
           gi|355524447|gb|AET04901.1| E3 ubiquitin-protein ligase
           CHFR [Medicago truncatula]
          Length = 471

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/64 (54%), Positives = 52/64 (81%)
 Frame = +3

Query: 3   PHCRSVVQFVGRNHFLHSIQEEILQSDGSLRRSNEELAVLNSYALIKSPLFIDNGKKPGH 182
           P CR+VVQFVG+NHFL +I E+++++D SLRRS++E+A+L++YA ++S L I +GKK   
Sbjct: 184 PQCRAVVQFVGKNHFLRTIAEDMVKADSSLRRSHDEVALLDTYASVRSNLVIGSGKK-SR 242

Query: 183 KRSR 194
           KR R
Sbjct: 243 KRER 246