BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040672
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   103   2e-20
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     100   2e-19
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...    96   2e-18
gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc...    96   2e-18
gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Jap...    96   2e-18

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/91 (52%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
 Frame = +1

Query: 4   KVRRSGRIPHEPERYGYLIGSDDTIH----DEPVTYQEAVSGLESNKWHDAMEAEMQSMS 171
           +VRRS R  HEP+R+   +  D  +     DEP +Y+EA+ G +S+KW +A ++EM+SMS
Sbjct: 410 EVRRSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAKSEMESMS 469

Query: 172 DNQVWNLVDVPNGCKTIGCKWVFKKKIDMDG 264
            N+VW LVD+P+G K I CKW+FKKKIDMDG
Sbjct: 470 QNKVWTLVDLPDGVKPIECKWIFKKKIDMDG 500


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
 Frame = +1

Query: 10   RRSGRIPHEPERYGYLIGSDDTI--HDEPVTYQEAVSGLESNKWHDAMEAEMQSMSDNQV 183
            RRS R    P+RY      D  +  +DEP TY+EA+ G +SNKW  AM++E++SM DNQV
Sbjct: 767  RRSERSRRAPDRYTGAEQRDILLLDNDEPKTYEEAMVGHDSNKWLGAMKSEIESMYDNQV 826

Query: 184  WNLVDVPNGCKTIGCKWVFKKKIDMDG 264
            WNLVD P+G KTI CKW+FKKK DMDG
Sbjct: 827  WNLVDPPDGVKTIECKWLFKKKADMDG 853


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
 Frame = +1

Query: 10   RRSGRIPHEPERYGYL-IGSDDTI---HDEPVTYQEAVSGLESNKWHDAMEAEMQSMSDN 177
            RRS RI   P RY  L IG  D +   +DEP TY+EA+ G +S KW  AM++E++SM  N
Sbjct: 1251 RRSERIRRTPARYALLTIGQRDILLLDNDEPTTYEEAMVGPDSEKWPGAMKSEIESMHVN 1310

Query: 178  QVWNLVDVPNGCKTIGCKWVFKKKIDMDG 264
            QVWNLVD P+G K I CKWVFKKK  +DG
Sbjct: 1311 QVWNLVDPPDGVKAIECKWVFKKKTYVDG 1339


>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 649

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/89 (55%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
 Frame = +1

Query: 10  RRSGRIPHEPERYGYLI-GSDDTI---HDEPVTYQEAVSGLESNKWHDAMEAEMQSMSDN 177
           RRS RI   P RY  L  G  D +   +DEP TY+EA+ G +S KW +AM++E++ M  N
Sbjct: 168 RRSERIRRTPARYALLTTGQRDILLLDNDEPTTYEEAMVGPDSEKWLEAMKSEIEFMHVN 227

Query: 178 QVWNLVDVPNGCKTIGCKWVFKKKIDMDG 264
           QVWNLVD P+G K I CKWVFKKK D+DG
Sbjct: 228 QVWNLVDPPDGVKAIECKWVFKKKTDVDG 256


>gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Japonica Group]
          Length = 637

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/89 (55%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
 Frame = +1

Query: 10  RRSGRIPHEPERYGYLI-GSDDTI---HDEPVTYQEAVSGLESNKWHDAMEAEMQSMSDN 177
           RRS RI   P RY  L  G  D +   +DEP TY+EA+ G +S KW +AM++E++ M  N
Sbjct: 168 RRSERIRRTPARYALLTTGQRDILLLDNDEPTTYEEAMVGPDSEKWLEAMKSEIEFMHVN 227

Query: 178 QVWNLVDVPNGCKTIGCKWVFKKKIDMDG 264
           QVWNLVD P+G K I CKWVFKKK D+DG
Sbjct: 228 QVWNLVDPPDGVKAIECKWVFKKKTDVDG 256