BLASTX nr result

ID: Atractylodes22_contig00040659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040659
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   149   2e-34
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   139   2e-31
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   139   3e-31
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   133   1e-29
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]   128   4e-28

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  149 bits (377), Expect = 2e-34
 Identities = 70/103 (67%), Positives = 82/103 (79%)
 Frame = -2

Query: 310  IPSNSSWIPKLLYEAHDTATGGHSGELKTYQRLAAGWFWVGMRKAVATYVRECHICQQNK 131
            IPS+S+ IPKLLYE HD   GGH+GELKTY RLAA W+W GMR+ VA YV +C ICQQ K
Sbjct: 1163 IPSSSTIIPKLLYEYHDAPMGGHAGELKTYLRLAAEWYWRGMRQEVARYVHQCLICQQQK 1222

Query: 130  AITTHPAGLLQPLPIPTRVWDEITMDFIEGLPRSQGWDTILVV 2
                HP GLLQPLPIP+ VW++I+MDFIEGLP S+G DTILV+
Sbjct: 1223 VSQQHPRGLLQPLPIPSLVWEDISMDFIEGLPVSKGVDTILVI 1265


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  139 bits (351), Expect = 2e-31
 Identities = 59/103 (57%), Positives = 79/103 (76%)
 Frame = -2

Query: 310  IPSNSSWIPKLLYEAHDTATGGHSGELKTYQRLAAGWFWVGMRKAVATYVRECHICQQNK 131
            +P   +   +L++E H T  GGHSG  KTYQRLA  WFW GM++ V T+++EC +CQQNK
Sbjct: 932  VPRKVAMTSRLIHEYHATPMGGHSGIFKTYQRLATEWFWKGMKQDVITFIQECAVCQQNK 991

Query: 130  AITTHPAGLLQPLPIPTRVWDEITMDFIEGLPRSQGWDTILVV 2
              +  PAGLLQPLPIPT +W++++MDF+EGLP+S GWD+ILVV
Sbjct: 992  TSSLAPAGLLQPLPIPTLIWEDVSMDFVEGLPKSGGWDSILVV 1034


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/103 (61%), Positives = 75/103 (72%)
 Frame = -2

Query: 310  IPSNSSWIPKLLYEAHDTATGGHSGELKTYQRLAAGWFWVGMRKAVATYVRECHICQQNK 131
            IP N      LL E H +  GGHSG  KTY+RLA  W+W GM+K V T+V+ C ICQQ K
Sbjct: 1096 IPKNVPLTTTLLEEYHSSPMGGHSGIFKTYKRLAGEWYWKGMKKDVTTFVQNCQICQQFK 1155

Query: 130  AITTHPAGLLQPLPIPTRVWDEITMDFIEGLPRSQGWDTILVV 2
              T  PAGLLQPLPIP  +W++I+MDF+EGLP+SQGWDTILVV
Sbjct: 1156 TSTLSPAGLLQPLPIPLAIWEDISMDFVEGLPKSQGWDTILVV 1198


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  133 bits (335), Expect = 1e-29
 Identities = 57/103 (55%), Positives = 79/103 (76%)
 Frame = -2

Query: 310  IPSNSSWIPKLLYEAHDTATGGHSGELKTYQRLAAGWFWVGMRKAVATYVRECHICQQNK 131
            +P  SS +P +L+  HD   GGHSG+L+TY+R+AA  +W GM+  +  YV +C +CQQNK
Sbjct: 856  LPKTSSLLPTILHTFHDLVVGGHSGQLRTYKRIAAELYWEGMKNDIKIYVDQCPVCQQNK 915

Query: 130  AITTHPAGLLQPLPIPTRVWDEITMDFIEGLPRSQGWDTILVV 2
                 PAGLLQPLPIP+R+W++I+MDFIEGLPRS+ +D++LVV
Sbjct: 916  TQALSPAGLLQPLPIPSRIWEDISMDFIEGLPRSRTFDSVLVV 958


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score =  128 bits (322), Expect = 4e-28
 Identities = 57/102 (55%), Positives = 75/102 (73%)
 Frame = -2

Query: 307 PSNSSWIPKLLYEAHDTATGGHSGELKTYQRLAAGWFWVGMRKAVATYVRECHICQQNKA 128
           P  S  +P LL E H +  GGHSG L TY+RL   +FWVGM+  +  +V +C +CQQNK 
Sbjct: 573 PKASPLVPALLQEGHASVVGGHSGFLWTYKRLTRDFFWVGMKNDIKEFVEKCLVCQQNKT 632

Query: 127 ITTHPAGLLQPLPIPTRVWDEITMDFIEGLPRSQGWDTILVV 2
           +T   AGLLQPLPIP ++WD++TMDFIEGLP+S+G++ ILVV
Sbjct: 633 LTLSLAGLLQPLPIPDKIWDDVTMDFIEGLPKSEGYNFILVV 674


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