BLASTX nr result

ID: Atractylodes22_contig00040558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040558
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFA37967.1| SVP1 [Actinidia chinensis]                             108   2e-24
ref|XP_002269295.1| PREDICTED: MADS-box protein SVP [Vitis vinif...   108   3e-24
gb|AFA37963.1| SVP1 [Actinidia deliciosa]                             107   5e-24
ref|XP_002310310.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-23
gb|AFC96914.1| SVP-like MADS-box protein, partial [Vitis vinifera]    108   6e-22

>gb|AFA37967.1| SVP1 [Actinidia chinensis]
          Length = 227

 Score =  108 bits (271), Expect(2) = 2e-24
 Identities = 53/83 (63%), Positives = 66/83 (79%)
 Frame = -2

Query: 348 KSLEAGLGRVVAKKGEVIMNEINRLQEKGVQLMEENDRLRQEMVEISNARIQIHTDAENV 169
           +SLEAGLGRV+ KKGE IMNEI  LQ+KG+ LM+EN+RLRQ+++E   AR    TD++NV
Sbjct: 129 RSLEAGLGRVIEKKGEKIMNEITHLQQKGMHLMDENERLRQQVMEACKARKHSATDSDNV 188

Query: 168 IGEEDESSVSVTNICNSAGPSQD 100
           I E+ +SS SVTNICNS GP QD
Sbjct: 189 INEQGQSSESVTNICNSTGPMQD 211



 Score = 28.5 bits (62), Expect(2) = 2e-24
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -3

Query: 98  KSSYTSLKLGLPYSG 54
           +SS TSLKLGLPYSG
Sbjct: 213 ESSDTSLKLGLPYSG 227


>ref|XP_002269295.1| PREDICTED: MADS-box protein SVP [Vitis vinifera]
           gi|297744859|emb|CBI38273.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  108 bits (269), Expect(2) = 3e-24
 Identities = 56/83 (67%), Positives = 65/83 (78%)
 Frame = -2

Query: 348 KSLEAGLGRVVAKKGEVIMNEINRLQEKGVQLMEENDRLRQEMVEISNARIQIHTDAENV 169
           KSLEAGL RV+ KKGE IM EI  LQ KGVQLMEEN+RLRQ++VEISN R Q+  D+EN+
Sbjct: 129 KSLEAGLSRVIQKKGERIMKEITDLQSKGVQLMEENERLRQQVVEISNRRRQVAGDSENM 188

Query: 168 IGEEDESSVSVTNICNSAGPSQD 100
             EE +SS SVTN+ NS GP QD
Sbjct: 189 FHEEGQSSESVTNVSNSNGPPQD 211



 Score = 28.5 bits (62), Expect(2) = 3e-24
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -3

Query: 98  KSSYTSLKLGLPYSG 54
           +SS TSLKLGLPYSG
Sbjct: 213 ESSDTSLKLGLPYSG 227


>gb|AFA37963.1| SVP1 [Actinidia deliciosa]
          Length = 227

 Score =  107 bits (267), Expect(2) = 5e-24
 Identities = 53/83 (63%), Positives = 65/83 (78%)
 Frame = -2

Query: 348 KSLEAGLGRVVAKKGEVIMNEINRLQEKGVQLMEENDRLRQEMVEISNARIQIHTDAENV 169
           +SLEAGL RV+ KKGE IMNEI  LQ+KG+ LM+EN+RLRQ+++E   AR    TD+ENV
Sbjct: 129 RSLEAGLDRVIEKKGEKIMNEITHLQQKGMHLMDENERLRQQVMEACKARKHSATDSENV 188

Query: 168 IGEEDESSVSVTNICNSAGPSQD 100
           I E+ +SS SVTNICNS GP QD
Sbjct: 189 INEQGQSSESVTNICNSTGPMQD 211



 Score = 28.5 bits (62), Expect(2) = 5e-24
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -3

Query: 98  KSSYTSLKLGLPYSG 54
           +SS TSLKLGLPYSG
Sbjct: 213 ESSDTSLKLGLPYSG 227


>ref|XP_002310310.1| predicted protein [Populus trichocarpa] gi|222853213|gb|EEE90760.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  105 bits (262), Expect(2) = 3e-23
 Identities = 54/83 (65%), Positives = 64/83 (77%)
 Frame = -2

Query: 348 KSLEAGLGRVVAKKGEVIMNEINRLQEKGVQLMEENDRLRQEMVEISNARIQIHTDAENV 169
           KSLEAGL  V+ KKGE IMNEI  LQ KG+QLMEEN+RL+Q++VEISN R  +  D+ENV
Sbjct: 129 KSLEAGLSCVIEKKGEKIMNEITDLQRKGMQLMEENERLKQQVVEISNGRKHVTADSENV 188

Query: 168 IGEEDESSVSVTNICNSAGPSQD 100
             EE +SS SVTN+CNS GP  D
Sbjct: 189 GYEEGQSSESVTNVCNSNGPLHD 211



 Score = 28.1 bits (61), Expect(2) = 3e-23
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -3

Query: 110 LHKTKSSYTSLKLGLPYS 57
           LH  +SS TSLKLGLP+S
Sbjct: 209 LHDYESSDTSLKLGLPFS 226


>gb|AFC96914.1| SVP-like MADS-box protein, partial [Vitis vinifera]
          Length = 240

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/83 (67%), Positives = 65/83 (78%)
 Frame = -2

Query: 348 KSLEAGLGRVVAKKGEVIMNEINRLQEKGVQLMEENDRLRQEMVEISNARIQIHTDAENV 169
           KSLEAGL RV+ KKGE IM EI  LQ KGVQLMEEN+RLRQ++VEISN R Q+  D+EN+
Sbjct: 129 KSLEAGLSRVIQKKGERIMKEITDLQSKGVQLMEENERLRQQVVEISNRRRQVAGDSENM 188

Query: 168 IGEEDESSVSVTNICNSAGPSQD 100
             EE +SS SVTN+ NS GP QD
Sbjct: 189 FHEEGQSSESVTNVSNSNGPPQD 211


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