BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040552
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...   253   1e-65
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...   243   1e-62
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ...   235   3e-60
ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat...   232   2e-59
dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]    229   2e-58

>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  253 bits (646), Expect = 1e-65
 Identities = 122/158 (77%), Positives = 135/158 (85%)
 Frame = +3

Query: 3   SWRQGFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEA 182
           SWRQ FE  DKVKTALVDMYAK GSV+VARNLFERL  KRVVSWNAMI GYAMHGHA EA
Sbjct: 303 SWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEA 362

Query: 183 LNLFKKMTRDAQPDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVDL 362
           L+LF++M R A+PDHITFVGVLSAC+HGGLL EG  FFE+M + Y+I PTVQHY+ MVDL
Sbjct: 363 LDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDL 422

Query: 363 IGHYGRLEEAYNLIKNMTITPDSGVWGALLNSCKIHGN 476
           +GH GRL+EAYNLI  M + PDSGVWGALLNSCKIH N
Sbjct: 423 LGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHAN 460



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
 Frame = +3

Query: 15  GFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEALNLF 194
           G+E    V  AL+DMYAK G V  AR +F++++ +  V WN+M+A Y+ +GH    L+L 
Sbjct: 206 GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLC 265

Query: 195 KKMT-RDAQPDHITFVGVLSACNHGGLLNEGREFFE-SMTQQYRITPTVQHYSSMVDLIG 368
            +M     +P   T V  +SA      L +GRE    S  Q++     V+  +++VD+  
Sbjct: 266 SEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVK--TALVDMYA 323

Query: 369 HYGRLEEAYNLIKNMTITPDSGVWGALLNSCKIHGN 476
             G +  A NL + + +      W A++    +HG+
Sbjct: 324 KCGSVRVARNLFERLGVKRVVS-WNAMITGYAMHGH 358



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
 Frame = +3

Query: 15  GFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEALNLF 194
           GF F   + T LV++Y    S+  AR LF+R+ +  +  WN +I GYA +G    A+ L+
Sbjct: 105 GFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLY 164

Query: 195 KKM-TRDAQPDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVDLIGH 371
            +M      PD+ TF  VL AC     +  GRE  E + Q       V   ++++D+   
Sbjct: 165 YQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAK 223

Query: 372 YGRLEEAYNLIKNMTITPDSGVWGALLNSCKIHGN 476
            G +  A  +   + +  D+ +W ++L +   +G+
Sbjct: 224 CGCVGSAREVFDKILVR-DAVLWNSMLAAYSQNGH 257


>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449522468|ref|XP_004168248.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  243 bits (620), Expect = 1e-62
 Identities = 116/158 (73%), Positives = 130/158 (82%)
 Frame = +3

Query: 3   SWRQGFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEA 182
           SWR GFE  DKVKTAL+DMYAKSGSV VAR+LFE L EKRVVSWNAMI GYAMHGHA EA
Sbjct: 229 SWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEA 288

Query: 183 LNLFKKMTRDAQPDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVDL 362
           L+LFK+M     PDHITFVGVL+AC+HGGLLNEG+  F SM   + I PTVQHY+ M+DL
Sbjct: 289 LDLFKEMKGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDL 348

Query: 363 IGHYGRLEEAYNLIKNMTITPDSGVWGALLNSCKIHGN 476
           +GH GRLEEAY LI  M + PD+GVWGALL+SCKIHGN
Sbjct: 349 LGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGN 386



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
 Frame = +3

Query: 9   RQGFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEALN 188
           R G E    V  AL+DMYAK G V+ AR +F+++ E+ VV WN+M+A Y+ +G   E+L 
Sbjct: 130 RSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLA 189

Query: 189 LFKKMT-RDAQPDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVDLI 365
           L + M     +P   TFV  ++A    GLL +G+E     + ++      +  ++++D+ 
Sbjct: 190 LCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKE-LHGYSWRHGFESNDKVKTALMDMY 248

Query: 366 GHYGRLEEA---YNLIKNMTITPDSGVWGALLNSCKIHGN 476
              G +  A   + L++   +      W A++    +HG+
Sbjct: 249 AKSGSVNVARSLFELLEEKRVVS----WNAMITGYAMHGH 284



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
 Frame = +3

Query: 15  GFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEALNLF 194
           G  F   + T LV++Y    S+  A  LF+R+ ++ +  WN MI GYA +G    A++L+
Sbjct: 31  GISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLY 90

Query: 195 KKMTRD--AQPDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVDLIG 368
            +M RD    PD  TF  VL AC+    + EG++  + + +   +   V   ++++D+  
Sbjct: 91  YQM-RDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRS-GLESDVFVGAALIDMYA 148

Query: 369 HYGRLEEAYNLIKNMTITPDSGVWGALLNSCKIHG 473
             G +E A  +   +    D   W ++L +   +G
Sbjct: 149 KCGCVESARQVFDKID-ERDVVCWNSMLATYSQNG 182


>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355486783|gb|AES67986.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  235 bits (599), Expect = 3e-60
 Identities = 110/157 (70%), Positives = 132/157 (84%)
 Frame = +3

Query: 6   WRQGFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEAL 185
           WR GF+  DKVKTAL+DMYAK GSVKVA  LFERL EKRVVSWNA+I GYAMHG A+ AL
Sbjct: 276 WRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGAL 335

Query: 186 NLFKKMTRDAQPDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVDLI 365
           +LF KM ++ +PDHITFVGVL+AC+ G LL+EGR  +  M + Y ITPTVQHY+ M+DL+
Sbjct: 336 DLFDKMRKEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLL 395

Query: 366 GHYGRLEEAYNLIKNMTITPDSGVWGALLNSCKIHGN 476
           GH G+L+EAY+LI+NM++ PDSGVWGALLNSCKIHGN
Sbjct: 396 GHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGN 432



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
 Frame = +3

Query: 9   RQGFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEALN 188
           + G+E    V  AL+DMYAK G V  A  +F++++ +  V WN+M+A YA +GH  E+++
Sbjct: 176 KSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESIS 235

Query: 189 LFKKMTRD-AQPDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVDLI 365
           L ++M  +  +P   T V V+S+      L  GRE       ++      +  ++++D+ 
Sbjct: 236 LCREMAANGVRPTEATLVTVISSSADVACLPYGRE-IHGFGWRHGFQSNDKVKTALIDMY 294

Query: 366 GHYGRLEEAYNLIKNMTITPDSGVWGALLNSCKIHG 473
              G ++ A  L + +        W A++    +HG
Sbjct: 295 AKCGSVKVALALFERLR-EKRVVSWNAIITGYAMHG 329



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 42/155 (27%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
 Frame = +3

Query: 15  GFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEALNLF 194
           G  +   + T LV +YA S S+  ARNLF+++ ++ +  WN +I GYA +G    A+ L+
Sbjct: 77  GIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILY 136

Query: 195 KKM-TRDAQPDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVDLIGH 371
            KM     +PD+ T   VL AC+    + EGR   E + +       +   ++++D+   
Sbjct: 137 HKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKS-GWERDLFVGAALIDMYAK 195

Query: 372 YGRLEEAYNLIKNMTITPDSGVWGALLNSCKIHGN 476
            G + +A  +   + +  D+ +W ++L +   +G+
Sbjct: 196 CGCVMDAGRVFDKIVVR-DAVLWNSMLAAYAQNGH 229


>ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  232 bits (592), Expect = 2e-59
 Identities = 108/157 (68%), Positives = 131/157 (83%)
 Frame = +3

Query: 6   WRQGFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEAL 185
           WR GF++ DKVKTAL+DMYAK GSVKVA  LFERL EKRVVSWNA+I GYAMHG A+EAL
Sbjct: 287 WRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEAL 346

Query: 186 NLFKKMTRDAQPDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVDLI 365
           +LF++M ++AQPDHITFVG L+AC+ G LL+EGR  +  M +  RI PTV+HY+ MVDL+
Sbjct: 347 DLFERMMKEAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLL 406

Query: 366 GHYGRLEEAYNLIKNMTITPDSGVWGALLNSCKIHGN 476
           GH G+L+EAY+LI+ M + PDSGVWGALLNSCK HGN
Sbjct: 407 GHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGN 443



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
 Frame = +3

Query: 9   RQGFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEALN 188
           R G+E    V  ALVDMYAK G V  AR++F++++++  V WN+M+A YA +GH  E+L+
Sbjct: 187 RSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLS 246

Query: 189 LFKKM-TRDAQPDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVDLI 365
           L  +M  +  +P   T V V+S+      L  GRE       ++      +  ++++D+ 
Sbjct: 247 LCCEMAAKGVRPTEATLVTVISSSADIACLPHGRE-IHGFGWRHGFQYNDKVKTALIDMY 305

Query: 366 GHYGRLEEAYNLIKNMTITPDSGVWGALLNSCKIHG 473
              G ++ A  L + +        W A++    +HG
Sbjct: 306 AKCGSVKVACVLFERLR-EKRVVSWNAIITGYAMHG 340



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 38/155 (24%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
 Frame = +3

Query: 15  GFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEALNLF 194
           G  +   + T LV+ Y+   S++ A +LF+++ +  +  WN +I  YA +G    A++L+
Sbjct: 88  GIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLY 147

Query: 195 KKMTR-DAQPDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVDLIGH 371
            +M     +PD+ T   VL AC+    + EGR   E + +       V   +++VD+   
Sbjct: 148 HQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRS-GWERDVFVGAALVDMYAK 206

Query: 372 YGRLEEAYNLIKNMTITPDSGVWGALLNSCKIHGN 476
            G + +A ++   + +  D+ +W ++L +   +G+
Sbjct: 207 CGCVVDARHVFDKI-VDRDAVLWNSMLAAYAQNGH 240


>dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  229 bits (583), Expect = 2e-58
 Identities = 109/159 (68%), Positives = 129/159 (81%), Gaps = 2/159 (1%)
 Frame = +3

Query: 6   WRQGFEFQDKVKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEAL 185
           WR+GF  QDK+KT+LVDMYAKSG V+VAR LFE+LM++ +VSWNAMI GY MHGHA EAL
Sbjct: 291 WRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEAL 350

Query: 186 NLFKKMTRDAQ--PDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVD 359
            LF KM  DAQ  PD+ITFVGVLSACNHGG++ E +EFF  M   Y I PTVQHY+ ++D
Sbjct: 351 ALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVID 410

Query: 360 LIGHYGRLEEAYNLIKNMTITPDSGVWGALLNSCKIHGN 476
           ++GH GR EEAY+LIK M+I PDSG+WGALLN CKIH N
Sbjct: 411 VLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKN 449



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 35/181 (19%)
 Frame = +3

Query: 36  VKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEALNLFKKMTRDA 215
           V   +VDMYAK G V  AR +F+ +  +  V WN+MIA Y  +G  MEAL L + M  + 
Sbjct: 200 VCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANG 259

Query: 216 -QPDHITFVGVLSACNHGGLLNEGREFF---------------ESMTQQYRITPTVQ--- 338
             P   T V  +SA      L  GRE                  S+   Y  +  VQ   
Sbjct: 260 IGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVAR 319

Query: 339 ------------HYSSMVDLIGHYGRLEEAYNLIKNM----TITPDSGVWGALLNSCKIH 470
                        +++M+   G +G  +EA  L   M     +TPD+  +  +L++C  H
Sbjct: 320 VLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACN-H 378

Query: 471 G 473
           G
Sbjct: 379 G 379



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
 Frame = +3

Query: 36  VKTALVDMYAKSGSVKVARNLFERLMEKRVVSWNAMIAGYAMHGHAMEALNLFKKMT-RD 212
           + T LVD+YA  G V  AR LF+ + ++ V  WN +I  YA  G    A+ L++ M    
Sbjct: 99  LSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHG 158

Query: 213 AQPDHITFVGVLSACNHGGLLNEGREFFESMTQQYRITPTVQHYSSMVDLIGHYGRLEEA 392
            +PD+ T+  VL AC     L  GRE  + ++   R    V   + +VD+    G +++A
Sbjct: 159 VEPDNFTYPLVLKACAALLDLETGREVHQRVSGT-RWGQDVFVCAGVVDMYAKCGCVDDA 217

Query: 393 YNLIKNMTITPDSGVWGALL 452
             +   + +  D+ VW +++
Sbjct: 218 RAVFDGIAVR-DAVVWNSMI 236