BLASTX nr result

ID: Atractylodes22_contig00040529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040529
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517779.1| pentatricopeptide repeat-containing protein,...   186   2e-45
ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containi...   181   5e-44
emb|CBI24939.3| unnamed protein product [Vitis vinifera]              181   5e-44
ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|2...   181   5e-44
ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44

>ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543051|gb|EEF44586.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  186 bits (472), Expect = 2e-45
 Identities = 85/111 (76%), Positives = 98/111 (88%)
 Frame = +2

Query: 2   WKSALKIFDLLRNQHWYEPRCQTYTKLLVMLGKCRQPKKAGLLFEVMLQDGLKPTVDVYT 181
           WKSALKIF+LLR QHWYEPRCQTYTKLL+MLGKCRQP++A LLFEVM  +GL+PT+DVYT
Sbjct: 108 WKSALKIFELLRKQHWYEPRCQTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYT 167

Query: 182 ALVSAYGYSGLLDKALEIIDDMKLILDCKPDVYTYSIIINCCTKLRRFDMI 334
           ALVSAYG SGLL KA   +D+MK + DCKPDVYTYS++IN CTKL RFD+I
Sbjct: 168 ALVSAYGESGLLAKAFSTVDEMKSVSDCKPDVYTYSVLINICTKLHRFDLI 218


>ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Vitis vinifera]
          Length = 538

 Score =  181 bits (459), Expect = 5e-44
 Identities = 83/111 (74%), Positives = 98/111 (88%)
 Frame = +2

Query: 2   WKSALKIFDLLRNQHWYEPRCQTYTKLLVMLGKCRQPKKAGLLFEVMLQDGLKPTVDVYT 181
           ++SALKIF LLR QHWYEPRCQTYTKLL+MLGKC+QP++A LLFEVML +GL+PT+DVYT
Sbjct: 108 YESALKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYT 167

Query: 182 ALVSAYGYSGLLDKALEIIDDMKLILDCKPDVYTYSIIINCCTKLRRFDMI 334
           ALVSAYG+SG LDKA   ++DMK + DCKPDVYTYSI+I CCT L RFD+I
Sbjct: 168 ALVSAYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLI 218


>emb|CBI24939.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  181 bits (459), Expect = 5e-44
 Identities = 83/111 (74%), Positives = 98/111 (88%)
 Frame = +2

Query: 2   WKSALKIFDLLRNQHWYEPRCQTYTKLLVMLGKCRQPKKAGLLFEVMLQDGLKPTVDVYT 181
           ++SALKIF LLR QHWYEPRCQTYTKLL+MLGKC+QP++A LLFEVML +GL+PT+DVYT
Sbjct: 108 YESALKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYT 167

Query: 182 ALVSAYGYSGLLDKALEIIDDMKLILDCKPDVYTYSIIINCCTKLRRFDMI 334
           ALVSAYG+SG LDKA   ++DMK + DCKPDVYTYSI+I CCT L RFD+I
Sbjct: 168 ALVSAYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLI 218


>ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|222849725|gb|EEE87272.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  181 bits (459), Expect = 5e-44
 Identities = 83/111 (74%), Positives = 96/111 (86%)
 Frame = +2

Query: 2   WKSALKIFDLLRNQHWYEPRCQTYTKLLVMLGKCRQPKKAGLLFEVMLQDGLKPTVDVYT 181
           W+SALKIF+LLR QHWYEPR +TYTKLL+MLGKCRQP++   LFEVML DGLKPT+DVYT
Sbjct: 95  WESALKIFELLRKQHWYEPRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDGLKPTIDVYT 154

Query: 182 ALVSAYGYSGLLDKALEIIDDMKLILDCKPDVYTYSIIINCCTKLRRFDMI 334
           ALVSAYG SG LDKA  I+ +MK I +CKPDVYTYSI+INCC KL RF++I
Sbjct: 155 ALVSAYGKSGQLDKAFSIVVEMKAISECKPDVYTYSILINCCIKLHRFELI 205


>ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Cucumis sativus]
           gi|449514880|ref|XP_004164505.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g53170-like [Cucumis sativus]
          Length = 477

 Score =  180 bits (457), Expect = 9e-44
 Identities = 79/111 (71%), Positives = 99/111 (89%)
 Frame = +2

Query: 2   WKSALKIFDLLRNQHWYEPRCQTYTKLLVMLGKCRQPKKAGLLFEVMLQDGLKPTVDVYT 181
           W++ALKIF LLR Q WYEPRCQTYTKLL++LGKC+QP++A LLFE+M  +GLKP++DVYT
Sbjct: 107 WETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYT 166

Query: 182 ALVSAYGYSGLLDKALEIIDDMKLILDCKPDVYTYSIIINCCTKLRRFDMI 334
           ALVSAYG SGLL KA+  +D+MK I DCKPDV+TYSI+I+CCT+LRRFD++
Sbjct: 167 ALVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLL 217


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