BLASTX nr result

ID: Atractylodes22_contig00040517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040517
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD...    87   1e-15
emb|CBI17339.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_003548835.1| PREDICTED: cell cycle checkpoint protein RAD...    76   2e-12
ref|XP_002866772.1| predicted protein [Arabidopsis lyrata subsp....    71   8e-11
ref|NP_201414.1| cell cycle checkpoint protein RAD17 [Arabidopsi...    69   4e-10

>ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis
           vinifera]
          Length = 1013

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = -3

Query: 263 FDEIKLFCEDFGQGFTGFKVSAGYTR-DNKELWLDKYKPCSLXXXXXXXXXXXXXXXXXX 87
           FDE++LFCE+FG+G TGFKVSAG +R   KELW+DKYKP SL                  
Sbjct: 59  FDEMRLFCEEFGEGLTGFKVSAGSSRCGGKELWVDKYKPRSLEELAVHKKKVEEVTVWFE 118

Query: 86  ERINMRKDEYCNHVLLITGQPGVGKSAT 3
           +R+   ++E CN +L+ITGQ GVGKSAT
Sbjct: 119 KRLRTSREEMCN-LLVITGQAGVGKSAT 145


>emb|CBI17339.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = -3

Query: 263 FDEIKLFCEDFGQGFTGFKVSAGYTR-DNKELWLDKYKPCSLXXXXXXXXXXXXXXXXXX 87
           FDE++LFCE+FG+G TGFKVSAG +R   KELW+DKYKP SL                  
Sbjct: 59  FDEMRLFCEEFGEGLTGFKVSAGSSRCGGKELWVDKYKPRSLEELAVHKKKVEEVTVWFE 118

Query: 86  ERINMRKDEYCNHVLLITGQPGVGKSAT 3
           +R+   ++E CN +L+ITGQ GVGKSAT
Sbjct: 119 KRLRTSREEMCN-LLVITGQAGVGKSAT 145


>ref|XP_003548835.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Glycine max]
          Length = 651

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = -3

Query: 278 NNVNPFDEIKLFCEDFGQGFTGFKVSAGYTRDNKE-LWLDKYKPCSLXXXXXXXXXXXXX 102
           ++++   EI LF +DF + FTG KVSAG  R   E LW+DKYKPCSL             
Sbjct: 108 SHLSKLHEIDLFGDDFNEVFTGSKVSAGTHRHYAEDLWIDKYKPCSLEELAVHKKKVEEV 167

Query: 101 XXXXXERINMRKDEYCNHVLLITGQPGVGKSA 6
                ER+   K  YCN+VL+I+GQ GVGKSA
Sbjct: 168 KTWFEERLKPSKGAYCNNVLVISGQAGVGKSA 199


>ref|XP_002866772.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312607|gb|EFH43031.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -3

Query: 260 DEIKLFCEDFGQGFTGFKVSAGYTRD-NKELWLDKYKPCSLXXXXXXXXXXXXXXXXXXE 84
           D+I+L  EDF +  +GFKVS+GY R  N +LW+DKY+P +L                  E
Sbjct: 51  DKIRLSFEDFDEALSGFKVSSGYERSKNTDLWVDKYRPRTLEELAVHKKKVEQVKLWFEE 110

Query: 83  RINMRKDEYCNHVLLITGQPGVGKSAT 3
            ++  KD   N+VLL+TGQ GVGKSAT
Sbjct: 111 SLDFSKDGLRNNVLLVTGQAGVGKSAT 137


>ref|NP_201414.1| cell cycle checkpoint protein RAD17 [Arabidopsis thaliana]
           gi|55976607|sp|Q9MBA3.1|RAD17_ARATH RecName: Full=Cell
           cycle checkpoint protein RAD17; Short=AtRAD17; AltName:
           Full=Radiation-sensitive protein 17
           gi|6855472|dbj|BAA90479.1| AtRAD17 [Arabidopsis
           thaliana] gi|10177128|dbj|BAB10418.1| AtRAD17
           [Arabidopsis thaliana] gi|332010780|gb|AED98163.1| cell
           cycle checkpoint protein RAD17 [Arabidopsis thaliana]
          Length = 599

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -3

Query: 260 DEIKLFCEDFGQGFTGFKVSAGYTRD-NKELWLDKYKPCSLXXXXXXXXXXXXXXXXXXE 84
           D+I+L  EDF +  +GFKVS+GY R  N +LW+DKY+P +L                  E
Sbjct: 62  DKIRLSFEDFDEALSGFKVSSGYERSKNTDLWVDKYRPRTLEELSVHKKKVDEVKLWFQE 121

Query: 83  RINMRKDEYCNHVLLITGQPGVGKSAT 3
            ++  K+   N+VLL+TGQ GVGKSAT
Sbjct: 122 SLDFLKNGLRNNVLLVTGQAGVGKSAT 148


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