BLASTX nr result

ID: Atractylodes22_contig00040514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040514
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]   122   4e-26
gb|AFJ66232.1| hypothetical protein 34G24.32 [Capsella rubella]       107   1e-21
ref|NP_199912.2| pentatricopeptide repeat-containing protein [Ar...   106   2e-21
dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana]        106   2e-21

>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Vitis vinifera]
          Length = 523

 Score =  122 bits (305), Expect = 4e-26
 Identities = 54/86 (62%), Positives = 64/86 (74%)
 Frame = +1

Query: 1   IWRAFLSACRTHRNPELGEVAVTKLSRLDSGDYVLLSNTYCSVSKWDTAEKVRHMMXXXX 180
           IWRA LSACR  +NPELGEVA+ K+S L+SGDY+LLSN YCS+ KWD+AE+VR MM    
Sbjct: 325 IWRALLSACRNFKNPELGEVAIAKISHLNSGDYILLSNMYCSLEKWDSAERVREMMKRDG 384

Query: 181 XXXXXXXXWIEFGGAIHQFKSGDRSH 258
                   W+E GG IHQFK+GDRSH
Sbjct: 385 VRKNRGRSWVELGGVIHQFKAGDRSH 410


>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
          Length = 562

 Score =  122 bits (305), Expect = 4e-26
 Identities = 54/86 (62%), Positives = 64/86 (74%)
 Frame = +1

Query: 1   IWRAFLSACRTHRNPELGEVAVTKLSRLDSGDYVLLSNTYCSVSKWDTAEKVRHMMXXXX 180
           IWRA LSACR  +NPELGEVA+ K+S L+SGDY+LLSN YCS+ KWD+AE+VR MM    
Sbjct: 364 IWRALLSACRNFKNPELGEVAIAKISHLNSGDYILLSNMYCSLEKWDSAERVREMMKRDG 423

Query: 181 XXXXXXXXWIEFGGAIHQFKSGDRSH 258
                   W+E GG IHQFK+GDRSH
Sbjct: 424 VRKNRGRSWVELGGVIHQFKAGDRSH 449


>gb|AFJ66232.1| hypothetical protein 34G24.32 [Capsella rubella]
          Length = 598

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/86 (54%), Positives = 60/86 (69%)
 Frame = +1

Query: 1   IWRAFLSACRTHRNPELGEVAVTKLSRLDSGDYVLLSNTYCSVSKWDTAEKVRHMMXXXX 180
           IWR+ LS+ RT++NPELGE+A+  LS+  SGDYVLLSN Y S  KW+ A+KVR +M    
Sbjct: 400 IWRSLLSSARTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWENAQKVRELMTKEG 459

Query: 181 XXXXXXXXWIEFGGAIHQFKSGDRSH 258
                   W+EFGG IH+FK+GD SH
Sbjct: 460 IRKAKGKSWVEFGGVIHRFKAGDTSH 485


>ref|NP_199912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635749|sp|Q9FI49.2|PP428_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g50990 gi|332008636|gb|AED96019.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 534

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/86 (54%), Positives = 61/86 (70%)
 Frame = +1

Query: 1   IWRAFLSACRTHRNPELGEVAVTKLSRLDSGDYVLLSNTYCSVSKWDTAEKVRHMMXXXX 180
           IWR+ LS+ RT++NPELGE+A+  LS+  SGDYVLLSN Y S  KW++A+KVR +M    
Sbjct: 336 IWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEG 395

Query: 181 XXXXXXXXWIEFGGAIHQFKSGDRSH 258
                   W+EFGG IH+FK+GD SH
Sbjct: 396 IRKAKGKSWLEFGGMIHRFKAGDTSH 421


>dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana]
          Length = 511

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/86 (54%), Positives = 61/86 (70%)
 Frame = +1

Query: 1   IWRAFLSACRTHRNPELGEVAVTKLSRLDSGDYVLLSNTYCSVSKWDTAEKVRHMMXXXX 180
           IWR+ LS+ RT++NPELGE+A+  LS+  SGDYVLLSN Y S  KW++A+KVR +M    
Sbjct: 313 IWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEG 372

Query: 181 XXXXXXXXWIEFGGAIHQFKSGDRSH 258
                   W+EFGG IH+FK+GD SH
Sbjct: 373 IRKAKGKSWLEFGGMIHRFKAGDTSH 398


Top