BLASTX nr result

ID: Atractylodes22_contig00040483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040483
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196051.2| pectate lyase family protein [Arabidopsis thali...   202   2e-50
ref|XP_002873143.1| pectate lyase family protein [Arabidopsis ly...   202   2e-50
gb|AAL24172.1| putative pectate lyase [Arabidopsis thaliana] gi|...   202   2e-50
ref|XP_003555884.1| PREDICTED: probable pectate lyase 12-like [G...   200   9e-50
ref|XP_003535737.1| PREDICTED: probable pectate lyase 12-like [G...   195   3e-48

>ref|NP_196051.2| pectate lyase family protein [Arabidopsis thaliana]
           gi|332003342|gb|AED90725.1| pectate lyase family protein
           [Arabidopsis thaliana]
          Length = 518

 Score =  202 bits (514), Expect = 2e-50
 Identities = 87/106 (82%), Positives = 98/106 (92%)
 Frame = +3

Query: 3   HHNEVMLMGHDDAYLPDKGMQVTFAFNHFGKGLIQRMPRCRHGYFHVVNNDFTEWKMYAI 182
           HH+EVML+GHDD Y  DKGMQVT AFNHFG+GL+QRMPRCRHGY HVVNNDFT W+MYAI
Sbjct: 286 HHDEVMLLGHDDRYTADKGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAI 345

Query: 183 GGSANPTINSQGNRYIAPPDPNAKEVTKRVEANEKNWAGWNWRTDG 320
           GGSA+PTINSQGNRY AP DPNAKEVTKRV++NEK+W+GWNWRT+G
Sbjct: 346 GGSASPTINSQGNRYTAPIDPNAKEVTKRVDSNEKHWSGWNWRTEG 391


>ref|XP_002873143.1| pectate lyase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318980|gb|EFH49402.1| pectate lyase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 519

 Score =  202 bits (514), Expect = 2e-50
 Identities = 87/106 (82%), Positives = 98/106 (92%)
 Frame = +3

Query: 3   HHNEVMLMGHDDAYLPDKGMQVTFAFNHFGKGLIQRMPRCRHGYFHVVNNDFTEWKMYAI 182
           HH+EVML+GHDD Y  DKGMQVT AFNHFG+GL+QRMPRCRHGY HVVNNDFT W+MYAI
Sbjct: 289 HHDEVMLLGHDDRYTADKGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAI 348

Query: 183 GGSANPTINSQGNRYIAPPDPNAKEVTKRVEANEKNWAGWNWRTDG 320
           GGSA+PTINSQGNRY AP DPNAKEVTKRV++NEK+W+GWNWRT+G
Sbjct: 349 GGSASPTINSQGNRYTAPIDPNAKEVTKRVDSNEKHWSGWNWRTEG 394


>gb|AAL24172.1| putative pectate lyase [Arabidopsis thaliana]
           gi|20466073|gb|AAM19958.1| At5g04300/At5g04300
           [Arabidopsis thaliana]
          Length = 349

 Score =  202 bits (514), Expect = 2e-50
 Identities = 87/106 (82%), Positives = 98/106 (92%)
 Frame = +3

Query: 3   HHNEVMLMGHDDAYLPDKGMQVTFAFNHFGKGLIQRMPRCRHGYFHVVNNDFTEWKMYAI 182
           HH+EVML+GHDD Y  DKGMQVT AFNHFG+GL+QRMPRCRHGY HVVNNDFT W+MYAI
Sbjct: 117 HHDEVMLLGHDDRYTADKGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAI 176

Query: 183 GGSANPTINSQGNRYIAPPDPNAKEVTKRVEANEKNWAGWNWRTDG 320
           GGSA+PTINSQGNRY AP DPNAKEVTKRV++NEK+W+GWNWRT+G
Sbjct: 177 GGSASPTINSQGNRYTAPIDPNAKEVTKRVDSNEKHWSGWNWRTEG 222


>ref|XP_003555884.1| PREDICTED: probable pectate lyase 12-like [Glycine max]
          Length = 502

 Score =  200 bits (509), Expect = 9e-50
 Identities = 85/106 (80%), Positives = 98/106 (92%)
 Frame = +3

Query: 3   HHNEVMLMGHDDAYLPDKGMQVTFAFNHFGKGLIQRMPRCRHGYFHVVNNDFTEWKMYAI 182
           HH+EVML+GHDD YLPD+GMQVT AFNHFG+GL+QRMPRCR GY HVVNNDFT+WKMYAI
Sbjct: 265 HHDEVMLLGHDDKYLPDRGMQVTIAFNHFGEGLVQRMPRCRLGYIHVVNNDFTQWKMYAI 324

Query: 183 GGSANPTINSQGNRYIAPPDPNAKEVTKRVEANEKNWAGWNWRTDG 320
           GGSANPTINSQGNRY AP DP+AKEVTKRV+ +++ W+GWNWRT+G
Sbjct: 325 GGSANPTINSQGNRYTAPADPDAKEVTKRVDTDDREWSGWNWRTEG 370


>ref|XP_003535737.1| PREDICTED: probable pectate lyase 12-like [Glycine max]
          Length = 676

 Score =  195 bits (496), Expect = 3e-48
 Identities = 83/106 (78%), Positives = 97/106 (91%)
 Frame = +3

Query: 3   HHNEVMLMGHDDAYLPDKGMQVTFAFNHFGKGLIQRMPRCRHGYFHVVNNDFTEWKMYAI 182
           HH+EVML+GHDD YL D+GMQVT AFNHFG+GL+QRMPRCR GY HVVNNDFT+W+MYAI
Sbjct: 436 HHDEVMLLGHDDKYLVDRGMQVTIAFNHFGEGLVQRMPRCRLGYIHVVNNDFTQWRMYAI 495

Query: 183 GGSANPTINSQGNRYIAPPDPNAKEVTKRVEANEKNWAGWNWRTDG 320
           GGSANPTINSQGNRY AP DP+AKEVTKRV+ +++ W+GWNWRT+G
Sbjct: 496 GGSANPTINSQGNRYTAPGDPDAKEVTKRVDTDDREWSGWNWRTEG 541


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