BLASTX nr result
ID: Atractylodes22_contig00040450
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00040450
(330 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago t... 135 5e-30
ref|XP_002517091.1| pentatricopeptide repeat-containing protein,... 130 1e-28
ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containi... 129 3e-28
ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group] g... 128 6e-28
gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japo... 128 6e-28
>ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 1024
Score = 135 bits (339), Expect = 5e-30
Identities = 62/109 (56%), Positives = 86/109 (78%)
Frame = +2
Query: 2 LELFYDMENAGLIPIESTLVCVLSACAQSGCLNLGQWMYFYYVKRNRIQLTVTLGNAFID 181
L+LF++M G++PIE TLV VLSAC Q CLNLG W++ Y+V I L+VTL NA +D
Sbjct: 475 LKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVD 534
Query: 182 MYAKCGNIDAAAELFNGMQEKDLVTWNSMIVGFASHGHAVKAINLFEQM 328
MYAKCG+IDAA E+F+ M E++L++WN+MI G+A++G A +AIN+F+QM
Sbjct: 535 MYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQM 583
Score = 70.5 bits (171), Expect = 1e-10
Identities = 39/108 (36%), Positives = 65/108 (60%)
Frame = +2
Query: 2 LELFYDMENAGLIPIESTLVCVLSACAQSGCLNLGQWMYFYYVKRNRIQLTVTLGNAFID 181
+E+F M + + P E TL+ V+SAC+ G L +G+ ++ ++N ++ +++L NA +D
Sbjct: 343 MEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKN-MRCSLSLHNALLD 401
Query: 182 MYAKCGNIDAAAELFNGMQEKDLVTWNSMIVGFASHGHAVKAINLFEQ 325
MY KC + A ELF+ M KD+ +W SM+ G+A G A F+Q
Sbjct: 402 MYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQ 449
>ref|XP_002517091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543726|gb|EEF45254.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 606
Score = 130 bits (327), Expect = 1e-28
Identities = 63/107 (58%), Positives = 81/107 (75%)
Frame = +2
Query: 8 LFYDMENAGLIPIESTLVCVLSACAQSGCLNLGQWMYFYYVKRNRIQLTVTLGNAFIDMY 187
LF+ M GLIPIE+TLVCVLSAC Q G L+LG+ ++ Y+++R + +V + NA IDMY
Sbjct: 478 LFHHMVGEGLIPIENTLVCVLSACGQLGYLDLGRLIHMYHIERKQKGTSVIIANALIDMY 537
Query: 188 AKCGNIDAAAELFNGMQEKDLVTWNSMIVGFASHGHAVKAINLFEQM 328
AKCG IDAAA +FNGM +DLV+WNSMI ASHGHA +A+ +F QM
Sbjct: 538 AKCGVIDAAARVFNGMPGRDLVSWNSMIAACASHGHAKQALLMFGQM 584
Score = 88.2 bits (217), Expect = 6e-16
Identities = 47/109 (43%), Positives = 69/109 (63%)
Frame = +2
Query: 2 LELFYDMENAGLIPIESTLVCVLSACAQSGCLNLGQWMYFYYVKRNRIQLTVTLGNAFID 181
L+LF M + + P E T++ VLSAC+Q G L+LG+ ++ YV+R + L+V L NA +D
Sbjct: 344 LKLFDSMLLSDVEPNEVTMISVLSACSQKGDLSLGKSIH-EYVRRKNLNLSVNLMNAILD 402
Query: 182 MYAKCGNIDAAAELFNGMQEKDLVTWNSMIVGFASHGHAVKAINLFEQM 328
MY KCG + AA E+F+ M KD+ +W SM+ G+A G A F+ M
Sbjct: 403 MYVKCGCLVAAREIFDSMGTKDVFSWTSMVNGYAKTGELEIARKFFDDM 451
>ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 129 bits (323), Expect = 3e-28
Identities = 64/110 (58%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 LELFYDMENA-GLIPIESTLVCVLSACAQSGCLNLGQWMYFYYVKRNRIQLTVTLGNAFI 178
LELF++M + GL+P E TLVCVLSA Q GCL +GQ ++ +V + IQ+++ L NA +
Sbjct: 370 LELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVM 429
Query: 179 DMYAKCGNIDAAAELFNGMQEKDLVTWNSMIVGFASHGHAVKAINLFEQM 328
DMYAKCG+IDAAA+LF+ M EK+LV+WNSMI +AS+GHA KA+ LF+QM
Sbjct: 430 DMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQM 479
Score = 83.2 bits (204), Expect = 2e-14
Identities = 39/109 (35%), Positives = 69/109 (63%)
Frame = +2
Query: 2 LELFYDMENAGLIPIESTLVCVLSACAQSGCLNLGQWMYFYYVKRNRIQLTVTLGNAFID 181
+ LF M ++ + P E T++ +LSAC+Q G +G+ ++ +++R I ++ L NA +D
Sbjct: 238 IALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLH-EHIRRKDITCSLNLLNAMLD 296
Query: 182 MYAKCGNIDAAAELFNGMQEKDLVTWNSMIVGFASHGHAVKAINLFEQM 328
MY KCG + A E+FN M+ +D+ +W S++ G+A +G A LF++M
Sbjct: 297 MYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEM 345
>ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa
Japonica Group]
Length = 704
Score = 128 bits (321), Expect = 6e-28
Identities = 60/107 (56%), Positives = 84/107 (78%)
Frame = +2
Query: 8 LFYDMENAGLIPIESTLVCVLSACAQSGCLNLGQWMYFYYVKRNRIQLTVTLGNAFIDMY 187
LF +M AG+ PI++TLV VLSACAQ GCL+LG+W+Y Y+ N+I LTV LGNA IDM+
Sbjct: 364 LFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMF 423
Query: 188 AKCGNIDAAAELFNGMQEKDLVTWNSMIVGFASHGHAVKAINLFEQM 328
AKCG++ A++LF+ M E+++V+WN+MI+ A HG + +AI LFEQ+
Sbjct: 424 AKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQL 470
Score = 70.5 bits (171), Expect = 1e-10
Identities = 38/99 (38%), Positives = 55/99 (55%)
Frame = +2
Query: 32 GLIPIESTLVCVLSACAQSGCLNLGQWMYFYYVKRNRIQLTVTLGNAFIDMYAKCGNIDA 211
G+ P TLV +SA Q G L G ++ YV + +V L NA +DM+ KCG +
Sbjct: 240 GMRPNAVTLVAAVSAIGQMGLLAFGIMLH-KYVTEGGVARSVNLDNALVDMFGKCGCVRY 298
Query: 212 AAELFNGMQEKDLVTWNSMIVGFASHGHAVKAINLFEQM 328
A E+F+GM+ KD+ +W SM+ +A G A LF+ M
Sbjct: 299 AREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDM 337
>gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 128 bits (321), Expect = 6e-28
Identities = 60/107 (56%), Positives = 84/107 (78%)
Frame = +2
Query: 8 LFYDMENAGLIPIESTLVCVLSACAQSGCLNLGQWMYFYYVKRNRIQLTVTLGNAFIDMY 187
LF +M AG+ PI++TLV VLSACAQ GCL+LG+W+Y Y+ N+I LTV LGNA IDM+
Sbjct: 364 LFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMF 423
Query: 188 AKCGNIDAAAELFNGMQEKDLVTWNSMIVGFASHGHAVKAINLFEQM 328
AKCG++ A++LF+ M E+++V+WN+MI+ A HG + +AI LFEQ+
Sbjct: 424 AKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQL 470
Score = 70.5 bits (171), Expect = 1e-10
Identities = 38/99 (38%), Positives = 55/99 (55%)
Frame = +2
Query: 32 GLIPIESTLVCVLSACAQSGCLNLGQWMYFYYVKRNRIQLTVTLGNAFIDMYAKCGNIDA 211
G+ P TLV +SA Q G L G ++ YV + +V L NA +DM+ KCG +
Sbjct: 240 GMRPNAVTLVAAVSAIGQMGLLAFGIMLH-KYVTEGGVARSVNLDNALVDMFGKCGCVRY 298
Query: 212 AAELFNGMQEKDLVTWNSMIVGFASHGHAVKAINLFEQM 328
A E+F+GM+ KD+ +W SM+ +A G A LF+ M
Sbjct: 299 AREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDM 337