BLASTX nr result
ID: Atractylodes22_contig00040384
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00040384
(495 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera] 168 4e-40
ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi... 167 6e-40
ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|2... 163 1e-38
ref|XP_002530223.1| pentatricopeptide repeat-containing protein,... 157 1e-36
ref|NP_194398.1| pentatricopeptide repeat-containing protein [Ar... 153 1e-35
>emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 168 bits (426), Expect = 4e-40
Identities = 87/157 (55%), Positives = 113/157 (71%)
Frame = +1
Query: 1 YNALLLGLCNEGKTRKAAYLVKELDKKKLVPNSSTFAALIRGQCARKNPDIAFQLYKSMI 180
YNAL+LGLC EG+T+KAAYLVKELD++ LVPNSSTF+ALI GQC RKN + AFQLYKSMI
Sbjct: 324 YNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMI 383
Query: 181 KSGCRPNEHTVKLLMSSFLQKDDYDGAYDVFMEMLERPVGLDPTILSDLCEGVSQVWKDM 360
+SGC PN HT K+L+S+F + +D+DGA +V EM ER + D LS+LC G+ K+
Sbjct: 384 RSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEE 443
Query: 361 LVMKLSKEVDDGRLGAGRYEKVKSIISQSNA*AEGKE 471
L +KL KE++ L ++K K+I N AE +E
Sbjct: 444 LALKLCKEMEMKHLMPEGFDKXKTI----NXRAESEE 476
>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 167 bits (424), Expect = 6e-40
Identities = 83/145 (57%), Positives = 108/145 (74%)
Frame = +1
Query: 1 YNALLLGLCNEGKTRKAAYLVKELDKKKLVPNSSTFAALIRGQCARKNPDIAFQLYKSMI 180
YNAL+LGLC EG+T+KAAYLVKELD++ LVPNSSTF+ALI GQC RKN + AFQLYKSMI
Sbjct: 457 YNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMI 516
Query: 181 KSGCRPNEHTVKLLMSSFLQKDDYDGAYDVFMEMLERPVGLDPTILSDLCEGVSQVWKDM 360
+SGC PN HT K+L+S+F + +D+DGA +V EM ER + D LS+LC G+ K+
Sbjct: 517 RSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEE 576
Query: 361 LVMKLSKEVDDGRLGAGRYEKVKSI 435
L +KL KE++ L ++K K+I
Sbjct: 577 LALKLCKEMEMKHLMPEGFDKSKTI 601
>ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|222861287|gb|EEE98829.1|
predicted protein [Populus trichocarpa]
Length = 478
Score = 163 bits (413), Expect = 1e-38
Identities = 77/134 (57%), Positives = 104/134 (77%)
Frame = +1
Query: 1 YNALLLGLCNEGKTRKAAYLVKELDKKKLVPNSSTFAALIRGQCARKNPDIAFQLYKSMI 180
YNAL+LGLC EGKT+KAA+LVKELDK+ LVPN+ST++ALI GQCARKN D AFQLYKSM+
Sbjct: 342 YNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMV 401
Query: 181 KSGCRPNEHTVKLLMSSFLQKDDYDGAYDVFMEMLERPVGLDPTILSDLCEGVSQVWKDM 360
+SGC PNE T K+L S+F++ +D++GA++V M+M R + D L ++ +G+ Q K+
Sbjct: 402 RSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKEN 461
Query: 361 LVMKLSKEVDDGRL 402
L MKL E++ RL
Sbjct: 462 LAMKLCHEMEARRL 475
Score = 57.8 bits (138), Expect = 9e-07
Identities = 37/129 (28%), Positives = 59/129 (45%)
Frame = +1
Query: 1 YNALLLGLCNEGKTRKAAYLVKELDKKKLVPNSSTFAALIRGQCARKNPDIAFQLYKSMI 180
+N +L LC GK KA +++E++ + PN ++ LI G C + IA +L M
Sbjct: 202 FNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMG 261
Query: 181 KSGCRPNEHTVKLLMSSFLQKDDYDGAYDVFMEMLERPVGLDPTILSDLCEGVSQVWKDM 360
K+G PN T L+ F ++ A F EM V + + L G QV
Sbjct: 262 KNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSN 321
Query: 361 LVMKLSKEV 387
+ K+ +E+
Sbjct: 322 MAGKVYEEM 330
>ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530270|gb|EEF32170.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 517
Score = 157 bits (396), Expect = 1e-36
Identities = 78/145 (53%), Positives = 102/145 (70%)
Frame = +1
Query: 1 YNALLLGLCNEGKTRKAAYLVKELDKKKLVPNSSTFAALIRGQCARKNPDIAFQLYKSMI 180
YNAL+LGLC EGKT+KAAY+VKELDK+ LVPN+STF+ALI GQC R N D AFQLYKSM+
Sbjct: 359 YNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMV 418
Query: 181 KSGCRPNEHTVKLLMSSFLQKDDYDGAYDVFMEMLERPVGLDPTILSDLCEGVSQVWKDM 360
+ GC PNE T +L+S+F + +D++GA+ V MEM ER +LS++ G+ K+
Sbjct: 419 RIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEH 478
Query: 361 LVMKLSKEVDDGRLGAGRYEKVKSI 435
L MKLS E+ + +EK K I
Sbjct: 479 LAMKLSSELKARHMMTKGFEKAKPI 503
>ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis
thaliana] gi|7269520|emb|CAB79523.1| putative protein
[Arabidopsis thaliana] gi|332659836|gb|AEE85236.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|332659837|gb|AEE85237.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 153 bits (387), Expect = 1e-35
Identities = 73/130 (56%), Positives = 93/130 (71%)
Frame = +1
Query: 1 YNALLLGLCNEGKTRKAAYLVKELDKKKLVPNSSTFAALIRGQCARKNPDIAFQLYKSMI 180
YNAL+ GLC + KTRKAA VKELDK+ LVPNSSTF+ALI GQC RKN D F+LYKSMI
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 181 KSGCRPNEHTVKLLMSSFLQKDDYDGAYDVFMEMLERPVGLDPTILSDLCEGVSQVWKDM 360
+SGC PNE T +L+S+F + +D+DGA V EM+ R + LD + +C G+ KD
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQ 500
Query: 361 LVMKLSKEVD 390
LV KL +E++
Sbjct: 501 LVKKLLQEME 510