BLASTX nr result

ID: Atractylodes22_contig00040379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040379
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    91   1e-16
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    87   1e-15
gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncat...    82   4e-14
gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncat...    82   4e-14
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    71   1e-10

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/96 (46%), Positives = 63/96 (65%)
 Frame = -2

Query: 290 TIKLVGSIGEIPILVLVDSRATHNFLSKKLAIALGLEIEPIKGLSISLGDGTRVCITEQC 111
           T+++ G I  + +LVL+DS A+HNF+S K+  ALGL I P    SI LGDG R+     C
Sbjct: 400 TMRVEGKIHNVDLLVLIDSGASHNFISPKVTTALGLVITPTVAKSIKLGDGHRLITNGVC 459

Query: 110 RGVAIQLGSIHWEISTLVHELGPLDLILRIAWLETL 3
           +GV +Q+G I   +  LV ELG +D++L +AWL TL
Sbjct: 460 KGVNMQMGGIEVIVDALVLELGGMDMVLGVAWLRTL 495


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/100 (42%), Positives = 64/100 (64%)
 Frame = -2

Query: 302 STPKTIKLVGSIGEIPILVLVDSRATHNFLSKKLAIALGLEIEPIKGLSISLGDGTRVCI 123
           S P++IKL+G I E+P++VLVDS ATHNF+S++L   +   +     +SI LGDG+    
Sbjct: 174 SRPQSIKLMGVIKEVPVVVLVDSGATHNFISQQLVHKMNWAVVDTPCMSIKLGDGSYSKT 233

Query: 122 TEQCRGVAIQLGSIHWEISTLVHELGPLDLILRIAWLETL 3
              C G+ + +G +H EI   + +LG +D++L I WL TL
Sbjct: 234 KGTCEGLEVDVGDVHLEIDAQLFDLGGVDMVLGIEWLRTL 273


>gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 42/92 (45%), Positives = 57/92 (61%)
 Frame = -2

Query: 287 IKLVGSIGEIPILVLVDSRATHNFLSKKLAIALGLEIEPIKGLSISLGDGTRVCITEQCR 108
           I+  G + EIP+L+LVDS A  NF+S++LA+ALGL I       I LGDG  V    +C 
Sbjct: 139 IRFQGKVREIPVLMLVDSGANKNFMSRRLALALGLRITETPVRRIRLGDGHVVPTLGECH 198

Query: 107 GVAIQLGSIHWEISTLVHELGPLDLILRIAWL 12
           GV I +  + WEI  ++ EL   DL+L +AWL
Sbjct: 199 GVIISVQGVEWEIDVMLFELRGYDLVLGMAWL 230


>gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 42/92 (45%), Positives = 57/92 (61%)
 Frame = -2

Query: 287 IKLVGSIGEIPILVLVDSRATHNFLSKKLAIALGLEIEPIKGLSISLGDGTRVCITEQCR 108
           I+  G + EIP+L+LVDS A  NF+S++LA+ALGL I       I LGDG  V    +C 
Sbjct: 139 IRFQGKVREIPVLMLVDSGANKNFMSRRLALALGLRITETPVRRIRLGDGHVVPTLGECH 198

Query: 107 GVAIQLGSIHWEISTLVHELGPLDLILRIAWL 12
           GV I +  + WEI  ++ EL   DL+L +AWL
Sbjct: 199 GVIISVQGVEWEIDVMLFELRGYDLVLGMAWL 230


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/101 (43%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
 Frame = -2

Query: 302 STPKTIKLVGSIGEIPILVLVDSRATHNFLSKKLAIALGLEIEPIKGLSISLGDGTRVCI 123
           S PKT+KL G I    ++V++D  ATHNFLS K    LG+ +   +   +SLGDG  V  
Sbjct: 478 SNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPVTESEEFGVSLGDGQAVRG 537

Query: 122 TEQCRGVAIQL-GSIHWEISTLVHELGPLDLILRIAWLETL 3
           T  CR VA+ L G +      L   LG  D+IL + WLETL
Sbjct: 538 TGICRAVALYLDGGLVVVEDFLPLGLGNSDVILGVQWLETL 578


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