BLASTX nr result

ID: Atractylodes22_contig00040360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040360
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869184.1| hypothetical protein ARALYDRAFT_328350 [Arab...    84   9e-15
ref|XP_002521847.1| Armadillo repeat-containing protein, putativ...    84   2e-14
emb|CAA19876.1| putative protein [Arabidopsis thaliana] gi|72703...    81   8e-14
ref|NP_567943.1| RING/U-box domain-containing protein [Arabidops...    81   1e-13
dbj|BAC43725.1| unknown protein [Arabidopsis thaliana]                 81   1e-13

>ref|XP_002869184.1| hypothetical protein ARALYDRAFT_328350 [Arabidopsis lyrata subsp.
           lyrata] gi|297315020|gb|EFH45443.1| hypothetical protein
           ARALYDRAFT_328350 [Arabidopsis lyrata subsp. lyrata]
          Length = 683

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/93 (46%), Positives = 54/93 (58%)
 Frame = -1

Query: 297 GGCIMEYWNYVATFRLCKCPMCSSPITRFTPEATLSLHQDAGVHEVLKNVRLYNCLFVGG 118
           G CI++YWNY A  R CKCPMC   IT+ +PEA+L   Q+  V EVL  VR YN LFVGG
Sbjct: 95  GNCILQYWNYAAISRPCKCPMCVRHITKLSPEASLQERQEQEVKEVLDKVRRYNRLFVGG 154

Query: 117 VCGFILVS*HPCRFPVSPAFGMLQLTVIHTNGF 19
           + GF+       +  VS  +   +   I T GF
Sbjct: 155 LTGFV-------QMFVSTLYTAAEFNFIPTGGF 180


>ref|XP_002521847.1| Armadillo repeat-containing protein, putative [Ricinus communis]
           gi|223538885|gb|EEF40483.1| Armadillo repeat-containing
           protein, putative [Ricinus communis]
          Length = 719

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
 Frame = -1

Query: 297 GGCIMEYWNYVATFRLCKCPMCSSPITRFTPEATL-SLHQDAGVHEVLKNVRLYNCLFVG 121
           G CI++YWNY A  + CKCPMC+S IT+ TPEA+L S HQD  V +VL+NV  YN LF+G
Sbjct: 88  GSCILQYWNYSAASKPCKCPMCASRITKLTPEASLYSQHQDQDVTKVLENVDRYNRLFIG 147

Query: 120 GVCGFI 103
           G  G +
Sbjct: 148 GALGLV 153


>emb|CAA19876.1| putative protein [Arabidopsis thaliana] gi|7270343|emb|CAB80111.1|
           putative protein [Arabidopsis thaliana]
          Length = 670

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/93 (44%), Positives = 53/93 (56%)
 Frame = -1

Query: 297 GGCIMEYWNYVATFRLCKCPMCSSPITRFTPEATLSLHQDAGVHEVLKNVRLYNCLFVGG 118
           G CI++YWNY A  R CKCPMC   IT+ +PE +L   Q+  V EVL  VR YN LFVGG
Sbjct: 95  GNCILQYWNYAAISRPCKCPMCVRHITKLSPEPSLQERQEQEVKEVLDKVRRYNRLFVGG 154

Query: 117 VCGFILVS*HPCRFPVSPAFGMLQLTVIHTNGF 19
           + GF+       +  +S  +   +   I T GF
Sbjct: 155 LTGFV-------QMFMSTLYTAAEFNFIPTGGF 180


>ref|NP_567943.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|63003762|gb|AAY25410.1| At4g33940 [Arabidopsis
           thaliana] gi|87116618|gb|ABD19673.1| At4g33940
           [Arabidopsis thaliana] gi|332660897|gb|AEE86297.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana]
          Length = 262

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/65 (55%), Positives = 44/65 (67%)
 Frame = -1

Query: 297 GGCIMEYWNYVATFRLCKCPMCSSPITRFTPEATLSLHQDAGVHEVLKNVRLYNCLFVGG 118
           G CI++YWNY A  R CKCPMC   IT+ +PE +L   Q+  V EVL  VR YN LFVGG
Sbjct: 95  GNCILQYWNYAAISRPCKCPMCVRHITKLSPEPSLQERQEQEVKEVLDKVRRYNRLFVGG 154

Query: 117 VCGFI 103
           + GF+
Sbjct: 155 LTGFV 159


>dbj|BAC43725.1| unknown protein [Arabidopsis thaliana]
          Length = 252

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/65 (55%), Positives = 44/65 (67%)
 Frame = -1

Query: 297 GGCIMEYWNYVATFRLCKCPMCSSPITRFTPEATLSLHQDAGVHEVLKNVRLYNCLFVGG 118
           G CI++YWNY A  R CKCPMC   IT+ +PE +L   Q+  V EVL  VR YN LFVGG
Sbjct: 85  GNCILQYWNYAAISRPCKCPMCVRHITKLSPEPSLQERQEQEVKEVLDKVRRYNRLFVGG 144

Query: 117 VCGFI 103
           + GF+
Sbjct: 145 LTGFV 149


Top