BLASTX nr result

ID: Atractylodes22_contig00040353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040353
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]                117   1e-24
ref|XP_003602950.1| Cyclin d2 [Medicago truncatula] gi|355491998...   115   3e-24
ref|XP_002306546.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
emb|CAN88855.1| D2/4-type cyclin [Populus trichocarpa]                114   1e-23
ref|XP_002514014.1| cyclin d, putative [Ricinus communis] gi|223...   112   3e-23

>gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]
          Length = 353

 Score =  117 bits (292), Expect = 1e-24
 Identities = 51/72 (70%), Positives = 59/72 (81%)
 Frame = +3

Query: 3   IEKECEQFVGSDYLKKLRNGNLDLVARQQAVDWIRKVHAHFKFGPLCAYLSINYLDRFLA 182
           +EKEC+     DYLK+LRNG+LD+ AR++AVDWI KVHAHF FGPLCAYLSINYLDRFL+
Sbjct: 70  VEKECQHLPNGDYLKRLRNGDLDMGARKEAVDWIAKVHAHFGFGPLCAYLSINYLDRFLS 129

Query: 183 VYEFPKDKAWMM 218
            YE P  K WMM
Sbjct: 130 AYELPNGKPWMM 141


>ref|XP_003602950.1| Cyclin d2 [Medicago truncatula] gi|355491998|gb|AES73201.1| Cyclin
           d2 [Medicago truncatula]
          Length = 362

 Score =  115 bits (289), Expect = 3e-24
 Identities = 50/72 (69%), Positives = 61/72 (84%)
 Frame = +3

Query: 3   IEKECEQFVGSDYLKKLRNGNLDLVARQQAVDWIRKVHAHFKFGPLCAYLSINYLDRFLA 182
           +EKEC+Q+ G+DYL KLR G+LD  AR + +DWI+KV AHF FGPLCAYLSINY+DRFL+
Sbjct: 71  LEKECQQWPGADYLNKLRFGDLDFEARNEVIDWIQKVRAHFGFGPLCAYLSINYMDRFLS 130

Query: 183 VYEFPKDKAWMM 218
           VYEFPK +AW M
Sbjct: 131 VYEFPKGRAWTM 142


>ref|XP_002306546.1| predicted protein [Populus trichocarpa] gi|222855995|gb|EEE93542.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  114 bits (284), Expect = 1e-23
 Identities = 50/72 (69%), Positives = 59/72 (81%)
 Frame = +3

Query: 3   IEKECEQFVGSDYLKKLRNGNLDLVARQQAVDWIRKVHAHFKFGPLCAYLSINYLDRFLA 182
           +EKEC+     DYLK+LRNG+L L AR++AVDWI KV+AHF FGPLCAYLS+NYLDRFL+
Sbjct: 67  VEKECQHLPSGDYLKRLRNGDLGLGARKEAVDWIAKVNAHFGFGPLCAYLSVNYLDRFLS 126

Query: 183 VYEFPKDKAWMM 218
            YE PK  AWMM
Sbjct: 127 AYELPKGNAWMM 138


>emb|CAN88855.1| D2/4-type cyclin [Populus trichocarpa]
          Length = 319

 Score =  114 bits (284), Expect = 1e-23
 Identities = 50/72 (69%), Positives = 59/72 (81%)
 Frame = +3

Query: 3   IEKECEQFVGSDYLKKLRNGNLDLVARQQAVDWIRKVHAHFKFGPLCAYLSINYLDRFLA 182
           +EKEC+     DYLK+LRNG+L L AR++AVDWI KV+AHF FGPLCAYLS+NYLDRFL+
Sbjct: 67  VEKECQHLPSGDYLKRLRNGDLGLGARKEAVDWIAKVNAHFGFGPLCAYLSVNYLDRFLS 126

Query: 183 VYEFPKDKAWMM 218
            YE PK  AWMM
Sbjct: 127 AYELPKGNAWMM 138


>ref|XP_002514014.1| cyclin d, putative [Ricinus communis] gi|223547100|gb|EEF48597.1|
           cyclin d, putative [Ricinus communis]
          Length = 354

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/72 (69%), Positives = 58/72 (80%)
 Frame = +3

Query: 3   IEKECEQFVGSDYLKKLRNGNLDLVARQQAVDWIRKVHAHFKFGPLCAYLSINYLDRFLA 182
           +EKEC+    +DYLK+LR G LDL AR++A+DWI KVHAHF FGPL AYLSINYLDRFL+
Sbjct: 73  VEKECQHLPNADYLKRLRRGELDLGARKEAIDWIGKVHAHFGFGPLSAYLSINYLDRFLS 132

Query: 183 VYEFPKDKAWMM 218
            YE PK K WMM
Sbjct: 133 AYELPKGKDWMM 144


Top