BLASTX nr result

ID: Atractylodes22_contig00040325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040325
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]    67   8e-13
gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]     69   5e-10
emb|CAN74220.1| hypothetical protein VITISV_032121 [Vitis vinifera]    60   2e-09
ref|XP_003633628.1| PREDICTED: uncharacterized protein LOC100854...    58   2e-09
gb|AFN88198.1| retropepsin-like protein [Phaseolus vulgaris]           61   2e-09

>emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]
          Length = 1048

 Score = 67.4 bits (163), Expect(2) = 8e-13
 Identities = 29/76 (38%), Positives = 45/76 (59%)
 Frame = -2

Query: 410 WVNTQQTGSINSWTNLTKKFLQKFFPFTKNFHLRDKINAFRERDDELVGAAWE*YKHLLR 231
           W+ +   G+I +W  L   FL K+FP  K+  +R+ I  F ++D E +  AWE +K LLR
Sbjct: 48  WLISLPPGTITTWDGLVNAFLAKYFPLAKSTKMRNDITNFLQQDQESLYEAWERFKDLLR 107

Query: 230 KCSHHAIALVVQIETF 183
           KC HH + + +Q + F
Sbjct: 108 KCPHHGLPIWMQAQMF 123



 Score = 30.8 bits (68), Expect(2) = 8e-13
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -1

Query: 150 MLDMACGGSIIN*TFNETYAFLESIVLNNYQADERREVPVKKAVGPLEVD 1
           M+D A GG+ IN T +E Y  ++ +  NN+     R    K+ VG  ++D
Sbjct: 134 MVDAASGGAFINKTPDEGYQLIKVMASNNFLKSTDRNAQ-KRTVGVHDID 182


>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/79 (40%), Positives = 47/79 (59%)
 Frame = -2

Query: 410 WVNTQQTGSINSWTNLTKKFLQKFFPFTKNFHLRDKINAFRERDDELVGAAWE*YKHLLR 231
           W+ +   GSI +W  L++ FL K+FP +K   LR++I  F +++ E +  AWE YK LLR
Sbjct: 25  WLQSLPPGSITTWDQLSEAFLAKYFPPSKTAQLRNQITTFTQKEGESLYDAWERYKDLLR 84

Query: 230 KCSHHAIALVVQIETFDKG 174
            C HH +   + I TF  G
Sbjct: 85  MCPHHGLEDWLIIHTFYNG 103


>emb|CAN74220.1| hypothetical protein VITISV_032121 [Vitis vinifera]
          Length = 1730

 Score = 59.7 bits (143), Expect(2) = 2e-09
 Identities = 28/87 (32%), Positives = 44/87 (50%)
 Frame = -2

Query: 434 TIPKSTTNWVNTQQTGSINSWTNLTKKFLQKFFPFTKNFHLRDKINAFRERDDELVGAAW 255
           T+     NW+N+ +  SI SWT+L  +FL KFFP  +   L+ +I+ F  +++E     W
Sbjct: 128 TLKDKAKNWLNSLRPRSIRSWTDLQAEFLNKFFPTHRTNGLKRQISNFSAKENEKFYECW 187

Query: 254 E*YKHLLRKCSHHAIALVVQIETFDKG 174
           E Y   +  C HH     + +  F  G
Sbjct: 188 ERYMEAINACPHHGFDTWLLVSYFYDG 214



 Score = 26.9 bits (58), Expect(2) = 2e-09
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 174 GLNMAGKQMLDMACGGSIIN*TFNETYAFLESIVLNNYQADERR--EVPVKKAVGPLE 7
           G++ + KQ+L+  CGG  ++    E   FL      +Y AD  R  + P K  VG ++
Sbjct: 214 GMSSSMKQLLETMCGGDFMSKNPEEAMDFL------SYVADVSRGWDEPTKGEVGKMK 265


>ref|XP_003633628.1| PREDICTED: uncharacterized protein LOC100854181 [Vitis vinifera]
          Length = 1267

 Score = 58.2 bits (139), Expect(2) = 2e-09
 Identities = 30/90 (33%), Positives = 49/90 (54%)
 Frame = -2

Query: 443 PKSTIPKSTTNWVNTQQTGSINSWTNLTKKFLQKFFPFTKNFHLRDKINAFRERDDELVG 264
           P S   K+ T W+N+ +  SI +W +L   FLQKFFP  +   L+ +I+ F+  +DE   
Sbjct: 99  PLSLKDKAKT-WLNSLRPYSIRNWGDLQSVFLQKFFPTHRTSALKKEISNFKAMEDEKFF 157

Query: 263 AAWE*YKHLLRKCSHHAIALVVQIETFDKG 174
           A WE ++ ++  C HH     + +  F +G
Sbjct: 158 ACWERFREIVAACPHHGFDNWMLVSYFYEG 187



 Score = 28.5 bits (62), Expect(2) = 2e-09
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 156 KQMLDMACGGSIIN*TFNETYAFLESIVLNNYQADE 49
           KQ+L+  CGG  +N   +E + FL+ +V  +   DE
Sbjct: 193 KQLLETMCGGDFMNKNPDEAFQFLDYVVEVSRSWDE 228


>gb|AFN88198.1| retropepsin-like protein [Phaseolus vulgaris]
          Length = 725

 Score = 60.8 bits (146), Expect(2) = 2e-09
 Identities = 28/88 (31%), Positives = 49/88 (55%)
 Frame = -2

Query: 437 STIPKSTTNWVNTQQTGSINSWTNLTKKFLQKFFPFTKNFHLRDKINAFRERDDELVGAA 258
           S++  +  +W+     GS+ +W  L + FL+KFFP ++   +R +I   R++D E +   
Sbjct: 62  SSLQDAAKDWLYYLPAGSVTNWERLKRVFLEKFFPASRATSIRKEICGIRQQDRESLYEY 121

Query: 257 WE*YKHLLRKCSHHAIALVVQIETFDKG 174
           WE +K L   C +H I   + I+ FD+G
Sbjct: 122 WEIFKRLCTSCPYHQINEQLLIQYFDEG 149



 Score = 25.8 bits (55), Expect(2) = 2e-09
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 174 GLNMAGKQMLDMACGGSIIN*TFNETYAFLESIVLNNYQADER 46
           GL    +QM+D A GG++++ T       +E +  NN Q   R
Sbjct: 149 GLIPINRQMIDAASGGALVDKTPVAARQVIEIMASNNQQFHTR 191


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