BLASTX nr result

ID: Atractylodes22_contig00040309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040309
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264711.2| PREDICTED: katanin p80 WD40 repeat-containin...    70   2e-10
emb|CBI35743.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus commu...    62   4e-08
ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containin...    62   6e-08
ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containin...    62   6e-08

>ref|XP_002264711.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog 1
           [Vitis vinifera]
          Length = 220

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/43 (74%), Positives = 38/43 (88%)
 Frame = -3

Query: 512 RLECCNQCHIQLQKIHRSLPNVIRRGGLPARSAQELNLILQQS 384
           R ECCNQC IQLQKI ++LP +IRRGGL A+SAQELNL+LQ+S
Sbjct: 178 RRECCNQCFIQLQKIQKNLPVIIRRGGLLAKSAQELNLVLQES 220


>emb|CBI35743.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/43 (74%), Positives = 38/43 (88%)
 Frame = -3

Query: 512 RLECCNQCHIQLQKIHRSLPNVIRRGGLPARSAQELNLILQQS 384
           R ECCNQC IQLQKI ++LP +IRRGGL A+SAQELNL+LQ+S
Sbjct: 272 RRECCNQCFIQLQKIQKNLPVIIRRGGLLAKSAQELNLVLQES 314


>ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus communis]
            gi|223539311|gb|EEF40902.1| katanin P80 subunit, putative
            [Ricinus communis]
          Length = 936

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -3

Query: 512  RLECCNQCHIQLQKIHRSLPNVIRRGGLPARSAQELNLILQQS 384
            RLECC QC +QLQKI + LP +IR+GG+ A+SA ELNL+LQ+S
Sbjct: 894  RLECCKQCFVQLQKIQQILPALIRKGGVLAKSAVELNLVLQES 936


>ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 825

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -3

Query: 512 RLECCNQCHIQLQKIHRSLPNVIRRGGLPARSAQELNLILQQS 384
           R ECCN+C ++LQKI  +LP +IR+GG+ ARSA ELNL+LQQS
Sbjct: 783 RRECCNKCFMELQKIQMTLPILIRKGGILARSALELNLVLQQS 825


>ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 824

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -3

Query: 512 RLECCNQCHIQLQKIHRSLPNVIRRGGLPARSAQELNLILQQS 384
           R ECCN+C ++LQKI  +LP +IR+GG+ ARSA ELNL+LQQS
Sbjct: 782 RRECCNKCFMELQKIQMTLPILIRKGGILARSALELNLVLQQS 824


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