BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040241
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   162   3e-38
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]        160   1e-37
gb|ABB47537.2| retrotransposon protein, putative, unclassified [...   157   6e-37
gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Ja...   157   6e-37
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc...   157   8e-37

>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108710383|gb|ABF98178.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  162 bits (409), Expect = 3e-38
 Identities = 75/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 LWSNILSLGQMTEIGYRVEMLHEFLKIHDEGG-RLIMKVERSRNRLYKIALQTTRPVCLM 231
           L+ N++SLGQ+TE G+RV M  + L++ D+   RL+MKV RS NRLY+I LQ   PVCL+
Sbjct: 379 LYCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVRRSSNRLYRIELQLASPVCLL 438

Query: 230 ANLDDEAWLWHARLGHVSFRVIEWMVQKELVRGVPRIQHPTQVCEGCMVAKQTKHPFPKE 51
           A+LDD AWLWHARLGHV+F  ++ +V KE+  GVP + HP Q+C+ C+VAKQ + PFP  
Sbjct: 439 ASLDDPAWLWHARLGHVNFHALKLLVDKEMAAGVPAVHHPNQLCQACLVAKQVRQPFPGM 498

Query: 50  AQWRASQPLELVHVDL 3
           A + A  PLEL+H+DL
Sbjct: 499 ANYLAEAPLELLHMDL 514


>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
          Length = 893

 Score =  160 bits (405), Expect = 1e-37
 Identities = 75/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 LWSNILSLGQMTEIGYRVEMLHEFLKIHDEGG-RLIMKVERSRNRLYKIALQTTRPVCLM 231
           L  N++SLGQ+TE G+RV M  + L++ D+   RL+MKV R+ NRLY+I LQ   PVCL+
Sbjct: 239 LCCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVRRTSNRLYRIELQLASPVCLL 298

Query: 230 ANLDDEAWLWHARLGHVSFRVIEWMVQKELVRGVPRIQHPTQVCEGCMVAKQTKHPFPKE 51
           A+LDD AWLWHARLGHV+F  ++ +V KE+V GVP + HP Q+C+ C+VAKQ +  FP  
Sbjct: 299 ASLDDPAWLWHARLGHVNFHALKLLVDKEMVAGVPAVHHPNQLCQACLVAKQVRQSFPGM 358

Query: 50  AQWRASQPLELVHVDL 3
           A +RA  PLEL+H+DL
Sbjct: 359 ANYRAEAPLELLHMDL 374


>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1172

 Score =  157 bits (398), Expect = 6e-37
 Identities = 73/136 (53%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 LWSNILSLGQMTEIGYRVEMLHEFLKIHDEGG-RLIMKVERSRNRLYKIALQTTRPVCLM 231
           L  N++SLGQ+TE G+RV M  + LK+ D+   RL+MKV R+ NRLY+I LQ    VCL+
Sbjct: 273 LCCNMVSLGQLTETGHRVMMDGDDLKVFDKNPWRLVMKVRRTSNRLYRIELQLASQVCLL 332

Query: 230 ANLDDEAWLWHARLGHVSFRVIEWMVQKELVRGVPRIQHPTQVCEGCMVAKQTKHPFPKE 51
           A+LD+ AWLWHAR+GHV+F  ++ +V KE+  GVP + HP Q+C+ C+VAKQ + PFP  
Sbjct: 333 ASLDNPAWLWHARIGHVNFHALKLLVDKEMASGVPTVHHPNQLCQACLVAKQVRQPFPGM 392

Query: 50  AQWRASQPLELVHVDL 3
           A +RA  PLEL+H+DL
Sbjct: 393 ANYRAEAPLELLHMDL 408


>gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1217

 Score =  157 bits (398), Expect = 6e-37
 Identities = 73/136 (53%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 LWSNILSLGQMTEIGYRVEMLHEFLKIHDEGG-RLIMKVERSRNRLYKIALQTTRPVCLM 231
           L  N++SLGQ+TE G+RV M  + LK+ D+   RL+MKV R+ NRLY+I LQ    VCL+
Sbjct: 417 LCCNMVSLGQLTETGHRVMMDGDDLKVFDKNPWRLVMKVRRTSNRLYRIELQLASQVCLL 476

Query: 230 ANLDDEAWLWHARLGHVSFRVIEWMVQKELVRGVPRIQHPTQVCEGCMVAKQTKHPFPKE 51
           A+LD+ AWLWHAR+GHV+F  ++ +V KE+  GVP + HP Q+C+ C+VAKQ + PFP  
Sbjct: 477 ASLDNPAWLWHARIGHVNFHALKLLVDKEMASGVPTVHHPNQLCQACLVAKQVRQPFPGM 536

Query: 50  AQWRASQPLELVHVDL 3
           A +RA  PLEL+H+DL
Sbjct: 537 ANYRAEAPLELLHMDL 552


>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1303

 Score =  157 bits (397), Expect = 8e-37
 Identities = 71/136 (52%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 LWSNILSLGQMTEIGYRVEMLHEFLKIHDEGG-RLIMKVERSRNRLYKIALQTTRPVCLM 231
           L  N++SLGQ+TE G+RV M ++ L++ D+   RL++KV R+ NRLY+I LQ   PVCL+
Sbjct: 419 LCCNMVSLGQLTETGHRVVMDNDDLEVFDKNPWRLVIKVRRTSNRLYRIELQLASPVCLL 478

Query: 230 ANLDDEAWLWHARLGHVSFRVIEWMVQKELVRGVPRIQHPTQVCEGCMVAKQTKHPFPKE 51
            +L D AWLWHARLGHV+F+ ++ +V KE+  GVP++ HP Q+C+ C++AKQ + PFP  
Sbjct: 479 TSLGDPAWLWHARLGHVNFQTLKLLVDKEMAAGVPQVHHPNQLCQACLMAKQIRQPFPAM 538

Query: 50  AQWRASQPLELVHVDL 3
           A +RA  PLEL+H+DL
Sbjct: 539 ANYRAEAPLELLHMDL 554