BLASTX nr result

ID: Atractylodes22_contig00040229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040229
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-38
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...    92   7e-38
emb|CBI19930.3| unnamed protein product [Vitis vinifera]               94   1e-37
ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...    94   1e-37
ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...    91   3e-36

>ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|222843928|gb|EEE81475.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score = 92.0 bits (227), Expect(2) = 4e-38
 Identities = 41/51 (80%), Positives = 48/51 (94%)
 Frame = -1

Query: 155 WCKNNMNSLVVSLAPKFTELRVLILRQDKPQLVDNAVETIANNCHDLEDLD 3
           WCKNNMN+LV+SLAPKFT+L+ L+LRQDKPQL DNAVETIA+ CHDL+DLD
Sbjct: 72  WCKNNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDNAVETIASYCHDLQDLD 122



 Score = 91.3 bits (225), Expect(2) = 4e-38
 Identities = 40/50 (80%), Positives = 44/50 (88%)
 Frame = -3

Query: 384 WKDIPMELLLRIVSQLDDRMVIVASAVCSGWRDAICRGLTHFSLSWCKNN 235
           WKDIPM+LLLRIVS +DDR +I+AS VCSGWRDAIC GLTH  LSWCKNN
Sbjct: 27  WKDIPMKLLLRIVSLVDDRTLIMASGVCSGWRDAICSGLTHLCLSWCKNN 76


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 92.4 bits (228), Expect(2) = 7e-38
 Identities = 41/50 (82%), Positives = 44/50 (88%)
 Frame = -3

Query: 384 WKDIPMELLLRIVSQLDDRMVIVASAVCSGWRDAICRGLTHFSLSWCKNN 235
           WKDIP+ELLLRIVS +DDR VI+AS VCSGWRDAIC GLTH  LSWCKNN
Sbjct: 32  WKDIPVELLLRIVSLVDDRTVIMASGVCSGWRDAICMGLTHLCLSWCKNN 81



 Score = 90.1 bits (222), Expect(2) = 7e-38
 Identities = 40/51 (78%), Positives = 48/51 (94%)
 Frame = -1

Query: 155 WCKNNMNSLVVSLAPKFTELRVLILRQDKPQLVDNAVETIANNCHDLEDLD 3
           WCKNNMN+LV+SLAPKFT+L+ L+LRQDKPQL D+AVETIA+ CHDL+DLD
Sbjct: 77  WCKNNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDHAVETIASYCHDLQDLD 127


>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score = 94.0 bits (232), Expect(2) = 1e-37
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = -3

Query: 384 WKDIPMELLLRIVSQLDDRMVIVASAVCSGWRDAICRGLTHFSLSWCKNN 235
           WKD+PMELLLRIV+ +DDR VI+AS VCSGWRDAIC GLTH SLSWCKNN
Sbjct: 97  WKDVPMELLLRIVALVDDRTVIMASGVCSGWRDAICLGLTHLSLSWCKNN 146



 Score = 87.8 bits (216), Expect(2) = 1e-37
 Identities = 40/51 (78%), Positives = 45/51 (88%)
 Frame = -1

Query: 155 WCKNNMNSLVVSLAPKFTELRVLILRQDKPQLVDNAVETIANNCHDLEDLD 3
           WCKNNMN+LV+SLAPKFT+L+ L LRQDKPQL D AVE IAN CHDL+DLD
Sbjct: 142 WCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAVEIIANYCHDLQDLD 192


>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score = 94.0 bits (232), Expect(2) = 1e-37
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = -3

Query: 384 WKDIPMELLLRIVSQLDDRMVIVASAVCSGWRDAICRGLTHFSLSWCKNN 235
           WKD+PMELLLRIV+ +DDR VI+AS VCSGWRDAIC GLTH SLSWCKNN
Sbjct: 39  WKDVPMELLLRIVALVDDRTVIMASGVCSGWRDAICLGLTHLSLSWCKNN 88



 Score = 87.8 bits (216), Expect(2) = 1e-37
 Identities = 40/51 (78%), Positives = 45/51 (88%)
 Frame = -1

Query: 155 WCKNNMNSLVVSLAPKFTELRVLILRQDKPQLVDNAVETIANNCHDLEDLD 3
           WCKNNMN+LV+SLAPKFT+L+ L LRQDKPQL D AVE IAN CHDL+DLD
Sbjct: 84  WCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAVEIIANYCHDLQDLD 134


>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 373

 Score = 91.3 bits (225), Expect(2) = 3e-36
 Identities = 40/50 (80%), Positives = 44/50 (88%)
 Frame = -3

Query: 384 WKDIPMELLLRIVSQLDDRMVIVASAVCSGWRDAICRGLTHFSLSWCKNN 235
           WKDIPMELLLRIVS +DDR +I+AS VCSGWRDAIC GLTH  LSWCKN+
Sbjct: 42  WKDIPMELLLRIVSLVDDRTIIMASGVCSGWRDAICLGLTHLCLSWCKNH 91



 Score = 85.9 bits (211), Expect(2) = 3e-36
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = -1

Query: 155 WCKNNMNSLVVSLAPKFTELRVLILRQDKPQLVDNAVETIANNCHDLEDLD 3
           WCKN+MN+LV+ LAPKFT+L  L+LRQDKPQL DNAVE IA  CHDLEDLD
Sbjct: 87  WCKNHMNNLVLWLAPKFTKLETLVLRQDKPQLEDNAVEAIARYCHDLEDLD 137


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