BLASTX nr result

ID: Atractylodes22_contig00040221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040221
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    75   7e-12
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    74   1e-11
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    72   6e-11

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 29/40 (72%), Positives = 37/40 (92%)
 Frame = -3

Query: 122 GEVRRLSDKELQSKRERGLCFRCDDKWTVGHRCRRRELSV 3
           GE+RRLS+KELQ KRE GLCFRCD+KW +GHRC+++ELS+
Sbjct: 332 GEIRRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSI 371


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = -3

Query: 122 GEVRRLSDKELQSKRERGLCFRCDDKWTVGHRCRRRELSV 3
           GE+RRLS+KELQ KRERGLCFRCDDKW+VGHRC ++ELSV
Sbjct: 289 GEIRRLSEKELQHKRERGLCFRCDDKWSVGHRC-KKELSV 327


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 29/40 (72%), Positives = 37/40 (92%)
 Frame = -3

Query: 122 GEVRRLSDKELQSKRERGLCFRCDDKWTVGHRCRRRELSV 3
           GE+RRL++KELQ KR +GLCF+CD+KW VGH+CRR+ELSV
Sbjct: 398 GEMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSV 437


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