BLASTX nr result

ID: Atractylodes22_contig00040181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040181
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549925.1| PREDICTED: ethylene-responsive transcription...    72   5e-11
ref|NP_001235341.1| dehydration-responsive element binding prote...    70   1e-10
ref|XP_002301249.1| AP2/ERF domain-containing transcription fact...    67   1e-09
ref|XP_002334238.1| AP2/ERF domain-containing transcription fact...    64   2e-08
ref|XP_002327006.1| AP2/ERF domain-containing transcription fact...    64   2e-08

>ref|XP_003549925.1| PREDICTED: ethylene-responsive transcription factor ERF034-like
           [Glycine max]
          Length = 232

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/108 (37%), Positives = 54/108 (50%)
 Frame = +2

Query: 8   SPKDIQEAATKAAAMTYGGDGAEPDSQPMLXXXXXXXXXXXXXQDGAEPYSQETMASDDD 187
           SPKDIQ AA KA+A+ +G    E +S+                   +   S  ++   DD
Sbjct: 131 SPKDIQAAAAKASALDFGHQSHEAESE------LSQAVSSSIQTQSSSSSSNSSLKGVDD 184

Query: 188 TFFDLPDLSLHQTHRSNGFCYASSWQLVAGVDASCRFGAEEPFLWEIY 331
           TF DLPDLSL  +H ++ F Y+S+W +         F  EEPFLWE Y
Sbjct: 185 TFLDLPDLSLDLSHGADEFHYSSAWLVAGAEHIELGFRLEEPFLWESY 232


>ref|NP_001235341.1| dehydration-responsive element binding protein 6 [Glycine max]
           gi|146552062|gb|ABQ42205.1| dehydration-responsive
           element binding protein 6 [Glycine max]
          Length = 230

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/108 (36%), Positives = 55/108 (50%)
 Frame = +2

Query: 8   SPKDIQEAATKAAAMTYGGDGAEPDSQPMLXXXXXXXXXXXXXQDGAEPYSQETMASDDD 187
           SPKDIQ AA KAAA+ +G    + +S+                Q  +   +  ++   DD
Sbjct: 128 SPKDIQAAAAKAAALDFGHRSHDAESE-----LSRAVSSSILTQASSSSSNSSSLKGVDD 182

Query: 188 TFFDLPDLSLHQTHRSNGFCYASSWQLVAGVDASCRFGAEEPFLWEIY 331
           TF DLPDLSL  +H ++ F Y+S+W +         F  E+PFLWE Y
Sbjct: 183 TFLDLPDLSLDLSHGADEFHYSSAWLVAGAEHIELGFRLEDPFLWESY 230


>ref|XP_002301249.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372085|gb|ABQ62974.1| TINY-like
           protein [Populus trichocarpa]
           gi|222842975|gb|EEE80522.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 272

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 48/118 (40%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
 Frame = +2

Query: 2   TKSPKDIQEAATKAAAMTY---------GGDGAEPDSQPMLXXXXXXXXXXXXXQDGAEP 154
           +KSPKDIQ AA KAAA ++         GG  AE +   +               D  + 
Sbjct: 166 SKSPKDIQAAAAKAAAASFTETRYCEGEGGGEAELNVSNL---------SDSLAMDNTQE 216

Query: 155 YSQETMASDDDTFFDLPDLSLHQTHRSNGFC-YASSWQLVAGVDASCRFGAEEPFLWE 325
            S       DDT FDLPDL +   H S+GFC Y+SSWQL A  D   R G  EPFL E
Sbjct: 217 SSSSPSTDSDDTLFDLPDLFIDGVHHSDGFCYYSSSWQLCA-ADTGFRLG--EPFLLE 271


>ref|XP_002334238.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372081|gb|ABQ62972.1| TINY-like
           protein [Populus trichocarpa]
           gi|222870106|gb|EEF07237.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 269

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 43/114 (37%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
 Frame = +2

Query: 2   TKSPKDIQEAATKAAAMTYGGDG-----AEPDSQPMLXXXXXXXXXXXXXQDGAEPYSQE 166
           +KSPKDIQ AA KAAA ++         AE ++                  D  +  S  
Sbjct: 158 SKSPKDIQAAAAKAAAASFPETRHCEAEAEAEADMSHAELNVSNLSDNLAMDNIQESSSS 217

Query: 167 TMASDDDTFFDLPDLSLHQTHRSNGFCYAS-SWQLVAGVDASCRFGAEEPFLWE 325
                DD  FDLPDL +   + S+GFCY S  WQL +   A   F  EEPFLWE
Sbjct: 218 PSTDVDDKLFDLPDLFIDGVNHSDGFCYYSPPWQLCS---ADTGFRLEEPFLWE 268


>ref|XP_002327006.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372083|gb|ABQ62973.1| TINY-like
           protein [Populus trichocarpa]
           gi|222835321|gb|EEE73756.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 269

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 43/114 (37%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
 Frame = +2

Query: 2   TKSPKDIQEAATKAAAMTYGGDG-----AEPDSQPMLXXXXXXXXXXXXXQDGAEPYSQE 166
           +KSPKDIQ AA KAAA ++         AE ++                  D  +  S  
Sbjct: 158 SKSPKDIQAAAAKAAAASFPETRHCEAEAEAEADMSHAELNVSNLSDNLAMDNIQESSSS 217

Query: 167 TMASDDDTFFDLPDLSLHQTHRSNGFCYAS-SWQLVAGVDASCRFGAEEPFLWE 325
                DD  FDLPDL +   + S+GFCY S  WQL +   A   F  EEPFLWE
Sbjct: 218 PSTDVDDKLFDLPDLFIDGVNHSDGFCYYSPPWQLCS---ADTGFRLEEPFLWE 268


Top