BLASTX nr result

ID: Atractylodes22_contig00040177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040177
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-14
emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]    82   6e-14
ref|XP_002533891.1| pentatricopeptide repeat-containing protein,...    79   4e-13
ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containi...    76   2e-12
ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12

>ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/52 (73%), Positives = 45/52 (86%)
 Frame = +1

Query: 1   GFQPDIISYNIVLKGLCSCNKRQDAIRYLNDAVAREIVPTAITWNILVKAVL 156
           G QPDIISYNI LKGLCSC++  DA+ +LNDAV R ++PTAITWNILV+AVL
Sbjct: 634 GPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVL 685


>emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/59 (64%), Positives = 47/59 (79%)
 Frame = +1

Query: 1   GFQPDIISYNIVLKGLCSCNKRQDAIRYLNDAVAREIVPTAITWNILVKAVLHLQPPMQ 177
           G QPDIISYNI LKGLCSC++  DA+ +LNDAV R ++PTAITWNILV+  L L+  M+
Sbjct: 609 GLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYME 667


>ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526155|gb|EEF28491.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 701

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = +1

Query: 1   GFQPDIISYNIVLKGLCSCNKRQDAIRYLNDAVAREIVPTAITWNILVKAVLHLQ 165
           G  PDIISYNI +KGLCSC++  DAI +LNDA+ R I+PTA+TWNILV+A ++ +
Sbjct: 636 GLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVNFR 690


>ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = +1

Query: 7   QPDIISYNIVLKGLCSCNKRQDAIRYLNDAVAREIVPTAITWNILVKAVL 156
           QPDIISYNI LKGLCSC +  DA+ +L+DA+ R  +PTAITWNILV+AV+
Sbjct: 632 QPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAVI 681


>ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|222867590|gb|EEF04721.1|
           predicted protein [Populus trichocarpa]
          Length = 694

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/56 (64%), Positives = 42/56 (75%)
 Frame = +1

Query: 1   GFQPDIISYNIVLKGLCSCNKRQDAIRYLNDAVAREIVPTAITWNILVKAVLHLQP 168
           GFQPDIISYNI LKGLCSC +  D I   +DA+   I+PT+ITW ILV+AVL L P
Sbjct: 634 GFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGP 689


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