BLASTX nr result

ID: Atractylodes22_contig00040131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040131
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308523.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
gb|EEC74618.1| hypothetical protein OsI_10234 [Oryza sativa Indi...    55   5e-06

>ref|XP_002308523.1| predicted protein [Populus trichocarpa] gi|222854499|gb|EEE92046.1|
           predicted protein [Populus trichocarpa]
          Length = 124

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/104 (38%), Positives = 46/104 (44%)
 Frame = -3

Query: 419 RHGKHSSTEKLLAISLGLVAVVSPLFIDKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           R  + SS EKL+AI LGL+AVVSPLFID++                              
Sbjct: 8   RTSRVSSCEKLVAIGLGLLAVVSPLFIDRR---PVSESELDEESIILASWVPLLLLVLIL 64

Query: 239 VAAFSCYLDHSLARFDPYWIYRVXXXXXXXXXXXXXXAHVLKCR 108
             A S YLD S  RFDPYWI+R               A VLKCR
Sbjct: 65  ATALSLYLDRSFTRFDPYWIHRAGGSSGGIMVILVILALVLKCR 108


>gb|EEC74618.1| hypothetical protein OsI_10234 [Oryza sativa Indica Group]
          Length = 106

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/102 (29%), Positives = 45/102 (44%)
 Frame = -3

Query: 413 GKHSSTEKLLAISLGLVAVVSPLFIDKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVA 234
           G+ SSTE+L+ + L ++AV+SPL+ID++                                
Sbjct: 2   GRPSSTERLVCVVLAVLAVLSPLYIDRRRPAAWDSDDEEEGGGVSALLLPALLIVLILAI 61

Query: 233 AFSCYLDHSLARFDPYWIYRVXXXXXXXXXXXXXXAHVLKCR 108
             +C+LD  + RFDPYWI+RV                VLKC+
Sbjct: 62  NVTCFLDRRVVRFDPYWIHRVGGSSCGLMATLLLLGFVLKCK 103


Top