BLASTX nr result

ID: Atractylodes22_contig00040063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040063
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycin...    82   5e-14
ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitoch...    80   2e-13
ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycin...    78   9e-13
ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|1...    77   1e-12
gb|ACF06503.1| structural constituent of ribosome [Elaeis guinee...    77   1e-12

>ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycine max]
           gi|255640572|gb|ACU20571.1| unknown [Glycine max]
          Length = 143

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/68 (57%), Positives = 44/68 (64%)
 Frame = -1

Query: 206 LTRVFGRRLFXXXXXXXXXXXXXXXXXXXXAHNPLEEFFEADRNPEEDKPVVYGRSWKAS 27
           L+R  GR LF                     HNPL+EFFEADR+P++DKPVVYGRSWKAS
Sbjct: 3   LSRTLGRTLFAAAARSKQYATTAAAAAGREGHNPLQEFFEADRSPDDDKPVVYGRSWKAS 62

Query: 26  ELRLKSWD 3
           ELRLKSWD
Sbjct: 63  ELRLKSWD 70


>ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitochondrial-like [Cucumis
           sativus] gi|449528917|ref|XP_004171448.1| PREDICTED: 39S
           ribosomal protein L47, mitochondrial-like [Cucumis
           sativus]
          Length = 143

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/68 (57%), Positives = 43/68 (63%)
 Frame = -1

Query: 206 LTRVFGRRLFXXXXXXXXXXXXXXXXXXXXAHNPLEEFFEADRNPEEDKPVVYGRSWKAS 27
           LTRVFGR                        +NPLEEFFEADR+P++ KPVVYGRSWKAS
Sbjct: 3   LTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKAS 62

Query: 26  ELRLKSWD 3
           ELRLKSWD
Sbjct: 63  ELRLKSWD 70


>ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycine max]
           gi|255629706|gb|ACU15202.1| unknown [Glycine max]
          Length = 142

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 33/37 (89%), Positives = 36/37 (97%)
 Frame = -1

Query: 113 HNPLEEFFEADRNPEEDKPVVYGRSWKASELRLKSWD 3
           HNPL+EFFEADR+PE+DKPVVYGRSWKA ELRLKSWD
Sbjct: 33  HNPLQEFFEADRSPEDDKPVVYGRSWKACELRLKSWD 69


>ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|118483659|gb|ABK93723.1|
           unknown [Populus trichocarpa]
           gi|222861024|gb|EEE98566.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/37 (89%), Positives = 36/37 (97%)
 Frame = -1

Query: 113 HNPLEEFFEADRNPEEDKPVVYGRSWKASELRLKSWD 3
           HNPLEEFFEADR+ +EDKP+VYGRSWKASELRLKSWD
Sbjct: 33  HNPLEEFFEADRSQDEDKPIVYGRSWKASELRLKSWD 69


>gb|ACF06503.1| structural constituent of ribosome [Elaeis guineensis]
          Length = 143

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/68 (52%), Positives = 43/68 (63%)
 Frame = -1

Query: 206 LTRVFGRRLFXXXXXXXXXXXXXXXXXXXXAHNPLEEFFEADRNPEEDKPVVYGRSWKAS 27
           ++R+FGR L+                     HNPLEEFFE DR  +++KPVVYGRSWKAS
Sbjct: 3   VSRIFGRVLYAAAKSESSAAAAAASASAKKLHNPLEEFFEVDRRTDDEKPVVYGRSWKAS 62

Query: 26  ELRLKSWD 3
           ELRLKSWD
Sbjct: 63  ELRLKSWD 70


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