BLASTX nr result

ID: Atractylodes22_contig00040046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040046
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514989.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_003631322.1| PREDICTED: uncharacterized protein LOC100853...    68   7e-10
ref|XP_002312638.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002315625.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08

>ref|XP_002514989.1| conserved hypothetical protein [Ricinus communis]
           gi|223546040|gb|EEF47543.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 358

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/86 (48%), Positives = 46/86 (53%), Gaps = 15/86 (17%)
 Frame = -3

Query: 214 RATTPAARSPIASGSSTPVRPCPNGGNAVDAG---------------GTTRFGRERVEPN 80
           RA TP ARSPI+SGSSTPVR C +G    D G                +   GR   EPN
Sbjct: 167 RAGTPVARSPISSGSSTPVR-CQHGLQCTDQGYQAGLASTESRGGEPSSASRGRHGEEPN 225

Query: 79  GDNMPENKTFDQAAKLNPLETRAMAW 2
           G  M ENK  D+A  LNPLE RA AW
Sbjct: 226 GCKMSENKDLDEARNLNPLEMRATAW 251


>ref|XP_003631322.1| PREDICTED: uncharacterized protein LOC100853782 [Vitis vinifera]
          Length = 359

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/79 (51%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
 Frame = -3

Query: 214 RATTPAARSPIASGSSTPVRPCPNG-------GNAVDAG-GTTRFGRERVEPNGDNMPEN 59
           RATTP ARSPI+SGSSTP R    G       G A   G G  RF  +  E N   MPEN
Sbjct: 174 RATTPVARSPISSGSSTPGRCYQTGLSSTESRGEAAPVGRGHGRFSSDGEESNACKMPEN 233

Query: 58  KTFDQAAKLNPLETRAMAW 2
           K  + A K NPL+TRA AW
Sbjct: 234 KNSEHARKPNPLDTRATAW 252


>ref|XP_002312638.1| predicted protein [Populus trichocarpa] gi|222852458|gb|EEE90005.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 41/88 (46%), Positives = 46/88 (52%), Gaps = 17/88 (19%)
 Frame = -3

Query: 214 RATTPAARSPIASGSSTPVRPCP--NGGNAVDAG---------------GTTRFGRERVE 86
           RATTPAARSPI+SGSSTPVR      G      G                T  +G+E   
Sbjct: 175 RATTPAARSPISSGSSTPVRGQHGLQGNEGYQTGLAVTESRGETPGVVSATRHYGQEF-- 232

Query: 85  PNGDNMPENKTFDQAAKLNPLETRAMAW 2
            NG  +PEN   DQA K+N LE RAMAW
Sbjct: 233 -NGSRIPENMDSDQARKMNALEARAMAW 259


>ref|XP_002315625.1| predicted protein [Populus trichocarpa] gi|222864665|gb|EEF01796.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/73 (50%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = -3

Query: 214 RATTPAARSPIASGSSTPVRPCPNGGNAVDA--GGTTRFGRERVEPNGDNMPENKTFDQA 41
           RATTPAARSP++SGS TPVR     G A  A  G +        E NG  + EN   DQ 
Sbjct: 172 RATTPAARSPVSSGSCTPVRGLNGRGEASCAPRGVSATRNYYGQESNGSRIHENMESDQV 231

Query: 40  AKLNPLETRAMAW 2
            K++ LETRAMAW
Sbjct: 232 RKVSTLETRAMAW 244


Top