BLASTX nr result

ID: Atractylodes22_contig00040043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040043
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   103   1e-20
ref|XP_002330506.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici...    94   9e-18
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...    92   3e-17
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-...    92   3e-17

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/71 (74%), Positives = 59/71 (83%)
 Frame = +2

Query: 107 MPINLTSNGIPAILAGDLNSKPLLQVLDIRPSSTSQERYRFLLSDSVLTQQAMLATQLND 286
           MP+NLT N I AI  GD+NSKPL+QVLDI+    SQERYRFLLSD+V TQQAMLATQLND
Sbjct: 1   MPVNLTPNAIAAINGGDVNSKPLVQVLDIKLIGNSQERYRFLLSDAVATQQAMLATQLND 60

Query: 287 RVKTGAVRTGS 319
           RVK+G VR GS
Sbjct: 61  RVKSGQVRKGS 71


>ref|XP_002330506.1| predicted protein [Populus trichocarpa] gi|222872440|gb|EEF09571.1|
           predicted protein [Populus trichocarpa]
          Length = 86

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/71 (66%), Positives = 56/71 (78%)
 Frame = +2

Query: 107 MPINLTSNGIPAILAGDLNSKPLLQVLDIRPSSTSQERYRFLLSDSVLTQQAMLATQLND 286
           MP+NLT N I  I  GD+N KPL+QVLDI+   ++QER+R L+SDSVLTQ AML TQLND
Sbjct: 1   MPVNLTPNAIAMINGGDVNLKPLVQVLDIKQMGSAQERFRLLVSDSVLTQHAMLGTQLND 60

Query: 287 RVKTGAVRTGS 319
           RVKTG V+ GS
Sbjct: 61  RVKTGLVKKGS 71


>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546518|gb|EEF48016.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 670

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/71 (66%), Positives = 56/71 (78%)
 Frame = +2

Query: 107 MPINLTSNGIPAILAGDLNSKPLLQVLDIRPSSTSQERYRFLLSDSVLTQQAMLATQLND 286
           MP+NLT N I  I  GD+N KPL+QV+DI+   ++QERYRFL+SDSV TQ AMLATQLND
Sbjct: 1   MPVNLTPNAISMINGGDVNMKPLVQVVDIKQIGSAQERYRFLISDSVSTQHAMLATQLND 60

Query: 287 RVKTGAVRTGS 319
           RVK G V+ GS
Sbjct: 61  RVKHGFVKKGS 71


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 623

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/71 (64%), Positives = 57/71 (80%)
 Frame = +2

Query: 107 MPINLTSNGIPAILAGDLNSKPLLQVLDIRPSSTSQERYRFLLSDSVLTQQAMLATQLND 286
           MP++LT N I AI+AGD+NSKPL+QVLDI+    +QERY  L+SD+V  +QAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 287 RVKTGAVRTGS 319
            VKTG V+ GS
Sbjct: 61  VVKTGRVKKGS 71


>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 694

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/71 (64%), Positives = 57/71 (80%)
 Frame = +2

Query: 107 MPINLTSNGIPAILAGDLNSKPLLQVLDIRPSSTSQERYRFLLSDSVLTQQAMLATQLND 286
           MP++LT N I AI+AGD+NSKPL+QVLDI+    +QERY  L+SD+V  +QAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 287 RVKTGAVRTGS 319
            VKTG V+ GS
Sbjct: 61  VVKTGRVKKGS 71


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